Phocoenobacter atlanticus: KGI96_00130
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Entry
KGI96_00130 CDS
T07499
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KGI96_00130 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
patl03400
]
KGI96_00130 (nfo)
Enzymes [BR:
patl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
KGI96_00130 (nfo)
DNA repair and recombination proteins [BR:
patl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KGI96_00130 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QVE20851
LinkDB
All DBs
Position
24169..25014
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AA seq
281 aa
AA seq
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MKYIGAHVSAAGGVENAVLRSVEIGANAFALFTKNQRQWKAAPLKVENIEKFKRFCQAHH
FNADQILPHDSYLINLGNPDTENLAKSREAFIDEMQRCDQLGIKLLNFHPGSHLNKMSEK
DCLSRIAESLNMAIATVPNVIAVIENTAGQGTNLGWHFDHLAEIIEQVDDKSRVGVCLDT
CHTFSAGYDISSFKGCEQVFTDFENSVGFQYLRGMHLNGSKTALGSRVDRHHSLQEGTIG
IDVFKYIMNDKRFDDIPLVLETINPDIWGEEIAFLRSLQAA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattggtgctcacgtaagtgctgctggaggagtagaaaatgcggtgttacga
tcggttgaaataggggcgaatgcttttgcattatttacgaaaaatcaacgtcaatggaaa
gcagcaccacttaaggtagaaaatattgaaaaatttaaacgtttttgtcaggcacatcat
tttaatgccgatcaaattttacctcacgatagttatcttattaatttaggtaatcctgat
accgagaacttggctaagtctcgagaagcatttattgatgaaatgcaacgttgtgatcaa
cttggtattaaattactcaattttcatcctggtagccatttaaataaaatgtctgaaaaa
gactgtttaagtcgtattgctgaatccttaaatatggcaattgcaacggtgccaaatgtc
attgctgtcatagaaaataccgcaggacaaggtacaaatttaggttggcattttgatcat
ttagctgagattattgaacaagtagatgataaaagtcgagtgggagtctgtttagacact
tgtcatacattttcggcaggttatgatatttctagttttaaaggttgtgaacaagtattt
actgattttgaaaatagtgttggttttcaatatttacgtggaatgcacctgaatggttca
aaaacagcgttaggtagccgagtggatcgccatcactcattgcaagaaggaacaattggc
atcgatgtatttaaatatataatgaatgataagcgttttgatgatattcctttagtgtta
gaaaccattaatcctgatatttggggcgaagaaattgcatttttgcgttcattacaagct
gcataa
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