Phocoenobacter atlanticus: KGI96_00205
Help
Entry
KGI96_00205 CDS
T07499
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGI96_00205 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
patl03019
]
KGI96_00205 (pcnB)
Enzymes [BR:
patl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KGI96_00205 (pcnB)
Messenger RNA biogenesis [BR:
patl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KGI96_00205 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QVE20866
LinkDB
All DBs
Position
complement(41673..43097)
Genome browser
AA seq
474 aa
AA seq
DB search
MDSCAPKTSNTQKPNKKETHQKSDMPSHILHKNITVNAPNYGISRHNISKNALSIVNKLS
QNNFEVYLVGGCIRDILLGKPPKDFDIATNARPEEIKRIFGRQCRLIGRRFRLAHIVYGR
EVYEVATFRAGHDQNLNNQISKTNDQGMLLRDNVYGSLEEDAKRRDFSVNALYFDVKHNL
IFDFFNGIQDLKEGKLRLIGDPTTRYQEDPVRMLRAIRFMAKLDMFLDKPTEQPIRQLAH
LLQHIPAARLFDESLKLLQAGYGVKTYELLQQYHLFEVLFPTISSSFTKDSDSNAERMIT
KALTSTDERIRDNLRINPAFLYAALLWYQMREKMDELKNEGGLNTHDAMMLAANEILAET
CKTIGLHRRHTAVIRDIWHLQFKMTKRVGKRPYQTLAHIKFRAGFDLLVMRAEIEKGDLV
ELSAWWHEFQLSNEVQRSEQIKNVHPHHSDDEKKKRKPRRKRYYKNRKPKTSIE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggattcttgtgcgccaaaaacatcaaatacacaaaaaccaaataaaaaagaaacacat
cagaaaagtgatatgccttcacatattttacataaaaatattacggttaatgccccaaat
tatggcatttctagacacaacatttcaaaaaatgcactttctatcgtaaataaactctct
caaaataattttgaagtttatttagttggcggatgtattcgcgatattttattgggaaaa
cccccaaaagattttgatattgcaaccaacgcccgccctgaagaaattaaacgtattttt
ggacgacaatgccgtttaattggtcgccgttttcgacttgcacatattgtttatggacga
gaagtttatgaagtcgcaacctttagagcggggcatgatcaaaacttaaataatcaaatt
tctaaaacaaatgatcaaggaatgttattgcgagataacgtttatggttcattagaagaa
gatgcaaaacgtcgagactttagtgttaatgctctttattttgatgttaagcataattta
atttttgatttttttaacggcattcaagatctcaaagaggggaaattacgtttaattggc
gatccaaccactcgctatcaagaagatccagttcgaatgcttagagccattcgctttatg
gcaaaactggatatgtttttagataaacccacagagcagcctatccgtcaattggctcat
ttattacaacatattccagctgcacgtctatttgatgaatcattaaaactattgcaagca
ggttatggcgtaaaaacctatgaattactacagcaatatcatttatttgaagtattattc
cctactatttctagttctttcactaaagatagtgactcgaatgcagaacgaatgataacc
aaagcacttacatcaactgatgagcgaattcgtgataatttacgtatcaatcctgcattt
ttatatgctgctctactttggtatcagatgcgtgaaaaaatggacgaactcaaaaatgag
ggaggactgaatactcacgatgcaatgatgctcgccgccaatgagattttagcagaaacc
tgtaaaaccattggcttacatcgtcgtcatacagcagtcattcgagatatttggcatcta
caatttaaaatgactaaacgtgtgggtaaacgtccttatcaaacccttgcacatattaag
tttagagcaggatttgatttgttagtaatgcgagctgaaattgaaaaaggggatttagtt
gagctgagtgcgtggtggcacgaatttcaactaagtaatgaagtacagcgttcagaacaa
atcaaaaatgttcaccctcatcatagtgatgatgagaagaaaaaacgtaaacctcgccgt
aaacgttattacaaaaatcgtaaacctaaaacaagcatagaataa
DBGET
integrated database retrieval system
