Phocoenobacter atlanticus: KGI96_00795
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Entry
KGI96_00795 CDS
T07499
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl03030
DNA replication
patl03430
Mismatch repair
patl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KGI96_00795
03430 Mismatch repair
KGI96_00795
03440 Homologous recombination
KGI96_00795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
patl03032
]
KGI96_00795
03400 DNA repair and recombination proteins [BR:
patl03400
]
KGI96_00795
Enzymes [BR:
patl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KGI96_00795
DNA replication proteins [BR:
patl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KGI96_00795
DNA repair and recombination proteins [BR:
patl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KGI96_00795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BapA_N
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
QVE20976
LinkDB
All DBs
Position
163970..164698
Genome browser
AA seq
242 aa
AA seq
DB search
MTIKNLIIHDDQLPADWQDFYQQQAEQSKNPLLKQFYQAGIINGDTPLSDIEFVALDFET
TGLDATVDDIVSIGLIPFDLKRIYCNQARHWIVRPKQELEEQSVVIHGITHSDIFNAPDL
HKVLDDLLTILANKIVVVHYRPIERQFFNSALMVRINEGILFPVVDTMQIEGNIQYEKRS
LIDRLLGKKIPSVRLANSRTRYGLPAYSAHNALTDAIATAELLQAQISYHFCENTPVKEL
WQ
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgacaataaaaaatctcattattcatgatgatcagcttccggcggattggcaagatttt
tatcaacagcaggcggaacaatcaaaaaatccgttattaaaacagttttatcaagcgggt
attattaatggagatacaccactaagtgacatagaatttgttgcccttgattttgaaaca
accgggttagatgccacggttgatgatattgtcagtattggtttaattccttttgattta
aagcgtatttattgtaatcaagcaaggcattggattgttcgtccaaaacaagaattagaa
gaacaatctgtggttattcacggtattacccacagtgatatttttaatgctcctgattta
cacaaagtactagatgatttgttaactattcttgccaataaaattgtggtagtgcattac
cgtccaattgaacgtcagttttttaattctgctttaatggtgagaattaatgaaggaatt
ctatttccagttgttgatacaatgcagattgaaggcaatattcaatatgaaaaaagatca
cttattgatcgtttgttgggaaaaaaaataccttctgttcgacttgctaatagtcgtact
cgctatgggttacctgcatattctgcccataatgctttaactgatgctattgctacggca
gaattattacaagctcaaattagttatcatttttgtgaaaacacccctgttaaagagctt
tggcaatag
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