Phocoenobacter atlanticus: KGI96_01135
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Entry
KGI96_01135 CDS
T07499
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
patl
Phocoenobacter atlanticus
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
patl03400
]
KGI96_01135
DNA repair and recombination proteins [BR:
patl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
KGI96_01135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
AAA_22
AAA_16
ResIII
AAA
CbiA
TrwB_AAD_bind
AAA_30
T2SSE
P-loop_TraG
Hydrolase
DUF815
AAA_7
AAA_19
nSTAND3
AAA_6
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QVE21036
LinkDB
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Position
240011..241498
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AA seq
495 aa
AA seq
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MTNYTIAQTKSGNTVSILSKMANRHGLIAGATGTGKTITLRTLAEHFSNDGIPVFLVDVK
GDISGLTQAGTMQGKVAERVEKFNLGAENYFSASPVSFWDVFGESGIPLRTTISEMGPVL
LSRLLNLNDTQEGLLNLVFRVADDQGLLLIDLKDLRAMLQYIGENAKQFRMEYGNVSAAS
IGAIQRSLLSLENEGATQLFGEPSLNLDDWLQTRDGRGVINILNSEKLINSPTLYSAFLL
WLMSELFENLPEVGDPEKPKFVMFFDEAHLIFDDAPKALVDKVEQVVRLIRSKGVGVYFV
TQNPLDLPDSVLGQLGNRVQHALRAFTPRDQKAVKAAAETFRINPDIDVKEAITQLGIGE
ALVSVLDEKGMPTPVEIAYIYPPKSQLDPISKSERDRFVKQDDLYAYYNEYVDEQSAYEN
LKQQQEIKQHQIEEEQKESNSLLGGIIASIFGKKKRREQNATEQMVSGITKAVGRNIRNQ
IARQIVRGVLGAMKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattatactatcgctcaaaccaaatcaggcaatacagtttcaattttatcgaaa
atggcaaatcgacatggtttgattgctggagcaacaggaaccggtaaaacaatcacgcta
cgcaccctcgcagaacattttagtaatgatggtatccctgttttcttagttgatgtcaaa
ggcgatatttctggcttaacgcaagcaggcactatgcaaggtaaagtggcagaacgtgtt
gagaaatttaatttaggggctgaaaattatttttctgcctcacctgtttctttttgggat
gtatttggagaaagtggcattcctcttagaaccaccatttcagaaatgggacccgtttta
ttaagccgactgctcaatttgaatgatacccaagaaggcttgttgaaccttgtttttcgt
gttgcagatgatcaagggttactgctgattgaccttaaagatctccgagcaatgctccaa
tatattggtgaaaatgccaaacaatttagaatggaatatggcaatgtctctgcagcaagt
attggtgcaattcaacgctctctactttctttggaaaatgaaggggcaacacagctattt
ggcgaaccttcccttaatttagatgactggttacaaactcgtgatggtcgaggtgttatc
aatattttaaattcggaaaaactgatcaattctccaacactgtatagcgcctttctatta
tggttgatgtcagaactttttgaaaatttacctgaagtgggggatcctgaaaaacctaaa
tttgtgatgttttttgatgaagcacatcttatctttgatgatgccccaaaagccttagta
gataaagtagaacaagtggtacgtttaattcgctctaaaggagtaggcgtttactttgtg
acccaaaacccccttgatttaccagatagtgtcttagggcaactcggtaaccgagttcaa
cacgcattgagagccttcacgcctcgtgatcaaaaagccgtaaaagcggcagcagaaaca
ttccgcatcaaccctgatattgatgttaaagaagctattactcagctaggcattggtgaa
gcgttagtttccgtattagatgaaaaaggaatgccgacacctgttgaaattgcgtatatt
tatccacctaaaagccaacttgatcccatttcaaaaagtgaacgagatcgctttgtaaaa
caagatgatttatatgcgtactacaatgaatatgttgatgaacaatctgcttacgaaaat
ttaaaacaacagcaagaaataaaacagcatcagattgaagaagagcaaaaagagagcaat
agcttactgggaggaattatcgcttctatttttggtaagaaaaaacgccgtgaacaaaat
gcaacagaacaaatggttagtggcataactaaagcggtaggacgtaatattcgtaaccaa
atcgcaagacaaattgtccgtggtgttttgggtgcaatgaaaaaataa
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