Phocoenobacter atlanticus: KGI96_01170
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Entry
KGI96_01170 CDS
T07499
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
patl
Phocoenobacter atlanticus
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
patl03016
]
KGI96_01170 (cmoB)
Transfer RNA biogenesis [BR:
patl03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
KGI96_01170 (cmoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_11
Methyltransf_31
Methyltransf_25
Methyltransf_12
CMAS
PCMT
NpmA
MTS
Motif
Other DBs
NCBI-ProteinID:
QVE21042
LinkDB
All DBs
Position
246685..247650
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AA seq
321 aa
AA seq
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MIDFRPFYQQLATSSLSHWLETLPLQMKQWQTQAHGDFEKWENALKHLPVKTASINLKDK
VEAIESEPLLSQGERQRFIHNLKLLKPWRKGPYHLYDVHIDCEWRSDFKWDRVLPHLSPL
KNRTILDVGCGSGYHMWRMVGEGAKLVVGIDPTDLFLCQFETVRKLLNNNRQAHLIPMGI
EEMQPLKAFDTVFSMGVLYHRKSPFDHFLQLKNQLRNGGELVLETLVIDGGINDVLVPSD
RYAKMRNVYFIPSVPALISWLEKAGFKNVRCVDEAVTTIEEQRRTEWIDTESLEYFLDPQ
DHSKTIEGYSAPKRAVIIANS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttcgtcctttttaccaacaattagcgacaagttcgctttctcactggctt
gaaaccttacctttacaaatgaaacagtggcaaacccaagctcacggtgattttgaaaag
tgggaaaatgccctaaaacatttacctgtgaaaacagcctctattaatttaaaagataaa
gtagaagccattgaaagtgagcctttattatcacaaggggaaagacagcgttttatccat
aatttaaaattgcttaaaccgtggcgaaaaggtccctatcatttgtatgatgtgcatatt
gattgcgaatggcgttctgattttaaatgggatcgtgtgttgcctcatttatctccatta
aaaaatcgtactattttagatgtgggctgtggcagtggctatcatatgtggcgaatggtt
ggcgaaggggcaaaattggttgtcggtattgatccaacagacttatttttatgtcaattt
gagacggtgcgtaagttattaaacaataaccgccaagcacatttaattccgatggggatt
gaagaaatgcaaccgctgaaagcttttgatacggtgttttcaatgggggtgttatatcat
cgtaaatcaccttttgaccattttttacagctgaaaaatcagttacgcaacgggggcgag
ctagtgcttgaaaccttagtgattgatgggggtattaatgatgtgcttgtgccaagcgat
cgctatgccaaaatgcgaaatgtctattttatcccgtctgtcccagctctgattagttgg
ttggaaaaagcaggctttaaaaatgtgcgttgtgttgatgaggcagtaacgaccattgaa
gaacaacgtcgcactgaatggatcgatactgaatccctcgaatattttttagatccacag
gatcattctaaaacgatcgaaggttattcagcaccgaaacgtgccgtgattattgcgaat
agttaa
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integrated database retrieval system
