Phocoenobacter atlanticus: KGI96_01235
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Entry
KGI96_01235 CDS
T07499
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KGI96_01235 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
patl01007
]
KGI96_01235 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
patl03016
]
KGI96_01235 (lysS)
Enzymes [BR:
patl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
KGI96_01235 (lysS)
Amino acid related enzymes [BR:
patl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KGI96_01235 (lysS)
Transfer RNA biogenesis [BR:
patl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KGI96_01235 (lysS)
Prokaryotic type
Other AARSs
KGI96_01235 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QVE21053
LinkDB
All DBs
Position
262761..264266
Genome browser
AA seq
501 aa
AA seq
DB search
MSEQQNQELDLNGEMLARREKLNHIREQGNPFPNTFRRENLAKDLQGTYAEIEGEVLKEL
HVEVKVAGRIMLRRVMGKASFMTIQDVSGQIQLYIARDNLPEGEYNDKVKLWDLGDIVGV
KGELFKTKTGELTVRCREVQLLTKALRPLPGKFHGLSDQETRYRQRYLDLISNEDSRNIF
LIRSKVISEIRQYFLEKDFIEVETPMLQVIPGGAAARPFITHHNALDVDMYLRIAPELYL
KRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYIDLMDNTEELLRRLAIN
ILGTTTVPYGEYTFDFGKPFERISMHDAIVKYGNGIERSDLDNFEKTCEIAKGLGIEIQK
SWGLGSVVNAIFEEVAEHKLIQPTFLTSHPAEISPLARRNDENPEVTDRFELFIGGREIG
NGFSELNDAEDQAQRFKDQVAAKEAGDDEAMFYDDDFVVALEHGLPPTAGEGLGIDRLAM
IFANAPSIRDVILFPAMRQKV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacaaaatcaagaattagacttaaacggtgagatgttagctcgtcgtgag
aaattaaaccatattcgtgagcaaggaaatccatttccaaatacgtttcgtcgtgaaaat
ttagccaaagatttacaaggtacttatgctgaaattgagggcgaagtattaaaagaactg
cacgttgaagtcaaagtagctggacgtattatgttacgtcgagtgatgggtaaagcctct
tttatgactattcaagatgtcagtggacaaatccagctttatattgctcgtgataatttg
ccagaaggtgagtataacgacaaagtaaaattatgggatcttggcgatattgttggggtt
aaaggtgaattatttaaaaccaaaactggcgaattaacagttcgttgtcgtgaagttcaa
cttttaaccaaagcattacgtcctcttcctggtaaattccacggtttaagtgatcaagaa
acacgttatcgtcagcgttatttagacttgatttcaaacgaagattctcgtaatattttc
ttaattcgttcaaaagtaattagtgaaatccgtcaatatttcttagaaaaagactttatt
gaagtggaaacgccgatgttacaagtgattcccggaggggcagccgcacgtccatttatc
acgcaccataatgcgttagatgtggatatgtatttacgtattgcgcctgaattatactta
aaacgccttgtggtgggcggttttgagcgtgtgtttgaacttaatagaaacttccgtaat
gaaggggtttcagttcgccacaatccagaatttacaatgattgaatactatcaagcgtat
gcagattacattgatttaatggataataccgaagaattattacgccgtttagctatcaat
attttaggtacaacaaccgtaccttatggcgaatatacctttgattttggtaagccattt
gagcgtatttcaatgcacgatgcaattgtaaaatatggcaatggtattgagcgttcagat
ttagataattttgagaaaacctgtgaaatcgcaaaaggtttaggtattgaaattcaaaaa
tcttggggtttaggttcagtcgttaatgccatttttgaagaagtggcggagcataaattg
attcaaccaactttcttaacttcacaccctgcggaaatttcgccattagcacgtcgtaat
gatgaaaatccagaagtaacggatcgttttgagttgtttattggtggacgtgaaatcggt
aatggtttctcagaattaaatgatgcagaagatcaagcacaacgtttcaaagatcaagta
gcagcaaaagaagcgggcgatgatgaggcgatgttctatgatgatgacttcgtagtggca
ttagaacacggtttaccaccaacagcgggtgaaggtttagggattgaccgtttagcaatg
atttttgcaaatgcaccgtcaattcgtgatgtgattttattcccagcaatgcgtcaaaaa
gtgtga
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