Phocoenobacter atlanticus: KGI96_01980
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Entry
KGI96_01980 CDS
T07499
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
patl
Phocoenobacter atlanticus
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
patl03036
]
KGI96_01980
03400 DNA repair and recombination proteins [BR:
patl03400
]
KGI96_01980
Chromosome and associated proteins [BR:
patl03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
KGI96_01980
DNA repair and recombination proteins [BR:
patl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KGI96_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
NDC80_loop
DUF677
SKA1
DUF6626
DUF4795
ARL2_Bind_BART
SCGB3A
Borrelia_orfA
Neuromodulin_N
DUF5965
Glyco_tran_28_C
Motif
Other DBs
NCBI-ProteinID:
QVE21188
LinkDB
All DBs
Position
complement(425851..426258)
Genome browser
AA seq
135 aa
AA seq
DB search
MSNKFKNFSNIRTLRAIARETSLSQLELLLQKLTQVIEEKKEEVAKQEAKHQKYLENLNK
YKQMLEQDGINPEDLVTALQPTIKNKQRKTTKLRPAKYKYIDENGNEKKWTGQGRTPKII
QKALDKGQSLSEFKI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaataaatttaaaaatttttctaatataagaacattacgtgcaattgctcgtgaa
acttcgttatctcaacttgaattactattacaaaaattaactcaagtcattgaagaaaag
aaagaagaagtagcaaagcaagaagctaaacatcaaaaatatcttgagaatttaaataaa
tacaaacagatgttagaacaagacggtatcaatcctgaagatttagttaccgctttacaa
ccaacaataaaaaataaacaacgtaaaaccacaaaactccgtcctgctaaatataaatat
attgatgaaaacggaaatgaaaaaaaatggactggacaaggtcgtacacccaaaataatt
caaaaagctttagataaaggacaatcactttctgaatttaaaatttaa
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