Phocoenobacter atlanticus: KGI96_02755
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Entry
KGI96_02755 CDS
T07499
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl00330
Arginine and proline metabolism
patl00480
Glutathione metabolism
patl01100
Metabolic pathways
patl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
KGI96_02755 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
KGI96_02755 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
KGI96_02755 (speF)
Enzymes [BR:
patl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
KGI96_02755 (speF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
GP88
Motif
Other DBs
NCBI-ProteinID:
QVE21841
LinkDB
All DBs
Position
complement(597234..599393)
Genome browser
AA seq
719 aa
AA seq
DB search
MLSLKIAYSPSIQPYFNTKRELILIERTDFTDIGAIVLSTDDIEQFIDRIQATEFNIPVF
AVIEAGKILNPKYFDKVYHIQDLNNYDINLYSRQIETAAHLYEEKMLPPFFKMLSEYVEM
GNSAFDCPGHQGGQYFRKHPAGRFLYDFYGENIFRSDICNADVKLGDLLIHEGAACDAQV
HAAQMFNADKTYFVLNGTSSANKVVTNALLSPGDLVLFDRNNHKSIHHGALVQAGATPIY
LETARNPFGFIGGIDSHCFEEDYLKSLVKEVAPEKLEQARPFRLAVIQLGTYDGTIYNAR
QVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGFS
QASQIHKKDKHIKGQTRYCNHKRFNNAFMLHASTSPFYPLFATLDVNAKIQGSPAGRKLW
LDCVKTGIEARKLILNSCELIKPFIPPYVKGKRWQDYNTDEIAQDLEFFKFHANDSWHKF
EGYTENQYFVDPCKFMLTTPGIDIETGEYEEFGIPATILANYLRENGIIPEKCDLNSILF
LLTPAETLTKMQTLVAQIALFEKHIKQNSLLKEVLPTVYANNCERYKGYTIRQLCQEMHN
LYVERNVKTLQRNLFRKATLPQYVMNPKDANIELIRNNVELVPLTEIVGRVAVEGALPYP
PGVICVVPGEQWNETAQQYFLALEDGINKLPGFAPEIQGVYLQKDPDGRTRAYGYVLTK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatctttaaaaattgcatatagtccatcaattcaaccttactttaatactaagaga
gaattgatcttaattgaaagaactgatttcactgatattggtgccattgtattaagtact
gatgatattgaacagtttattgatcgtattcaagcaactgaatttaatatacctgtcttt
gctgtaattgaagcaggaaaaatattaaatcccaagtattttgataaagtttaccatatt
caagatttgaataactacgatatcaatttatacagtcgccaaattgaaactgcggctcac
ttatatgaagaaaaaatgcttccgccattcttcaaaatgttaagtgagtatgttgaaatg
gggaactctgcatttgactgcccaggacatcaaggcggacaatattttagaaaacaccct
gctggtcgtttcttatatgatttttatggcgaaaatattttccgttccgatatttgtaat
gcggacgttaaactcggcgatttattaattcacgaaggtgcagcttgtgatgcccaagtt
cacgctgctcaaatgtttaacgcagataaaacctatttcgtgttaaacggcacatcttcg
gcaaataaagtagttacaaatgctctactctctccaggcgatttagtgttatttgataga
aataaccataaatctattcatcacggtgcattagttcaagcaggagcaacacctatttat
ttagaaactgcccgtaatccatttggttttattggtggaattgatagccactgctttgag
gaagactacttaaaatccttagttaaagaagtagcacctgaaaaactagaacaagctcgt
ccgttccgcctagcggttattcaattaggcacttatgacggtacaatttataacgcacgt
caggtcgtggataaaattgggcatctttgtgattatattttatttgactctgcttgggtg
ggttatgaacaatttattccaatgatgaaagactgctcgcctttactattagaattaaat
gaaaatgatccaggtattatcgttacccaatctgttcataaacaacaagctggtttctca
caagcctcacaaatccataaaaaagataaacacattaaaggtcaaactcgctattgtaat
cataaacgattcaataatgcctttatgttacatgcatcaactagcccattctatccttta
tttgcaacgttagatgtgaacgcaaaaattcaaggaagtcctgctggtcgtaaactatgg
ttagattgcgtaaaaacaggtattgaagcacgtaaattaatcttaaattcttgtgaattg
attaaaccatttattccaccttatgttaaaggtaaaagatggcaagattataataccgat
gaaattgcccaagatcttgaatttttcaaattccacgctaacgactcgtggcataaattc
gaaggttataccgaaaatcaatacttcgttgatccttgcaaatttatgctaaccacacct
ggaattgatattgaaactggagaatatgaagaatttggtattccagccacaattcttgcg
aactatttgcgagaaaatggcattattccagaaaaatgcgacttgaactccatactattt
ttgttaacgcctgctgaaactttaacaaaaatgcagaccttagtcgcccaaatcgcactg
tttgagaagcatatcaaacaaaactcattattgaaagaggtattaccaactgtttatgca
aataattgcgaacgatataaaggttacacaatccgccaactttgccaagagatgcacaat
ctctacgtcgaaagaaatgtgaaaaccttacaacgtaatttattccgcaaagcaacgtta
cctcaatatgtaatgaatccaaaagatgccaatattgagctgatccgtaacaatgttgag
cttgttccattaactgaaattgttggtcgtgtcgctgttgaaggagcattaccttatcct
ccaggtgtaatttgtgttgtaccgggtgagcaatggaatgaaacagctcaacaatatttc
cttgcgttagaagacgggatcaataaattgcctggatttgcacctgaaattcaaggtgtt
tatctacaaaaagatcctgatggtcgcactcgtgcctatggctacgttttaaccaaataa
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