Phocoenobacter atlanticus: KGI96_03290
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Entry
KGI96_03290 CDS
T07499
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
patl
Phocoenobacter atlanticus
Pathway
patl02010
ABC transporters
patl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KGI96_03290 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KGI96_03290 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
patl02000
]
KGI96_03290 (lsrA)
Transporters [BR:
patl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
KGI96_03290 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_22
AAA_29
MukB
Motif
Other DBs
NCBI-ProteinID:
QVE21419
LinkDB
All DBs
Position
complement(713087..714604)
Genome browser
AA seq
505 aa
AA seq
DB search
MQSQILEKKCLLDAYNISKYFSGVEVLKEINFSLYVGEVHALLGGNGAGKSTLMKIIAGI
QPQDTGTLKINGRIQTNLSPNKAHSLGIYLVPQEPLLFPNLTVKENILFALHKNDEIDKK
LTTLLNELNCHLNLEMQAGSLDVADQQLVEIMRGLMRDASILILDEPTASLTPAETDNLF
KQIRSLLTKGVGIVFISHKLPEVWQISHRVSVMRDGYIALTGQTNELDKDDIIKAITPKS
KNTQLTDNQKLWLELPGHNRIKSREEPILQVNNLTGEGFKNVSFKIYPGEILGLAGVVGA
GRTELAETLYGLRNKKSGEILFDDQEISTLNIKERLQKGIVYLPEDRQASGLYLDAPLTW
NTCGLTYSNMGLWINSAKENAILERYHRAIGIKFSSGQQTVRTLSGGNQQKVLIAKCLEA
NPVLLIVDEPTRGVDVSARVDIYQLIKSIAKQNVAILFISSDLEEVEQMSDRVLVMHDGD
ISHSLVGDDINTNNIMQIAFGDTQA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcaaattttagaaaaaaagtgcttattagatgcatataatatcagcaaatat
ttttctggggtagaagtacttaaagaaattaacttttcattgtatgtaggagaggtgcat
gctttattaggtggtaatggcgccggtaaatcgacgttaatgaaaattattgcgggtatt
cagcctcaagatacaggaacattaaaaataaatggaagaatacaaacgaatttatcacca
aataaagcacattctcttggtatttatttagtacctcaagagcctttgctcttcccaaat
ctaacagtaaaagaaaatattctatttgctttacataaaaatgatgaaatagataaaaaa
ttaacaacattactaaatgaattaaattgccatttaaatcttgaaatgcaagcgggttct
ttagatgtcgcagatcagcaacttgttgaaattatgagagggttaatgcgagatgcctca
atattaattttagatgagccaaccgcctctttaacacccgcagaaacagacaatttattt
aaacaaataagatcattattaacaaaaggtgttggaattgtttttatttctcataaatta
cctgaggtatggcaaatatcacatagagtaagtgtaatgagagatggttatattgcttta
acaggacaaacgaatgaacttgataaagacgatattataaaagcaattaccccaaaatct
aaaaatacccaactaacagataatcaaaaactttggctggaattaccagggcacaatcgt
attaaatctagagaggagcctattttacaagtaaataatcttactggagaaggatttaag
aatgtttcttttaaaatttatcctggtgaaattcttggtttagctggtgttgttggtgca
ggaagaacagagcttgcggaaaccttatatggattacgtaataaaaaatcaggagaaatt
ttatttgatgatcaagaaattagtactttaaatattaaagaaagattacagaaaggaatt
gtatatttacctgaagatcgacaagcctcaggtttatatttagatgcacctctgacttgg
aatacttgtggattaacttatagcaatatggggctttggataaattcagcaaaagaaaat
gctattttagagcgttaccatagagcaattggaattaaattttctagtggtcagcaaact
gtaagaactttatctggaggtaatcaacaaaaagtactcattgccaaatgcttagaagct
aatcctgtattattgattgtagatgaaccaacgagaggtgtagatgtaagtgcaagagta
gatatttatcaattaattaaaagtattgcaaaacagaatgttgctattctatttatatca
tcagatttagaagaagttgagcaaatgtctgatcgagttttggtaatgcacgatggagat
attagccattctttggttggtgatgacataaatactaataacataatgcaaatagctttt
ggtgatactcaagcatag
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