Phocoenobacter atlanticus: KGI96_03360
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Entry
KGI96_03360 CDS
T07499
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGI96_03360 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
patl03019
]
KGI96_03360 (pnp)
03016 Transfer RNA biogenesis [BR:
patl03016
]
KGI96_03360 (pnp)
Enzymes [BR:
patl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KGI96_03360 (pnp)
Messenger RNA biogenesis [BR:
patl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KGI96_03360 (pnp)
Transfer RNA biogenesis [BR:
patl03016
]
Prokaryotic type
tRNA degradation factors
KGI96_03360 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_SLS1_2
KH_2
S1_2
KH_KhpA-B
KH-I_KHDC4-BBP
aRib
OB_RRP5_4th
UPF0181
Motif
Other DBs
NCBI-ProteinID:
QVE21433
LinkDB
All DBs
Position
727044..729200
Genome browser
AA seq
718 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVSVVAKKEMREGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFLNEIQIVATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQFVLNPTISEQAISRLDLVVAG
TQNAVLMVESEADILSEEQMLAAVVFGHEQQQVVIQNINELVAEAGKPCWDWKAPEPNTT
LIEKVTALAESRIGDAFRIIEKQDRYAKIDEIKAEVVAQLAAEIESEEVSEGEIVDIITS
LESKVVRGRVIAGEPRIDGRTKETVRALDICTGVLPRTHGSAIFTRGETQALVVATLGTE
RDAQNIDELTGEKSDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPSAE
EFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQ
AIAGPREEISDFAPRIYTIKIDPKKIKDVIGKGGATIRSLTEETGTSIDIDDDGTVKIAA
IDGNAAKRVMARIEEITAEVEVNTVYSGKVTRVVDFGAFVSILGGKEGLVHISQIAEERV
EKVGDYLTLGQEVNVKVVEIDRQGRIRLTMKGVDAASTTEELPQEETETVLEVEQTEE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaattgtaaaacaatttaaatacggtcaacacaccgtaacactagaaacgggt
gcaatcgctcgtcaagcaacagcagccgtaatggcaagtatggacgatacaaccgtattc
gtttcagtcgtagcaaaaaaagaaatgcgtgaaggacaagatttcttcccattaaccgta
aactatcaagagcgtacttacgcagcaggtcgtattccaggtggtttctttaaacgtgaa
gggcgtccttctgaaggcgaaaccttaacagctcgtttaattgaccgtcctattcgtcct
ttattccctgaaggtttcttaaatgaaatccaaattgttgcgacagtggtgtctgtcaat
cctcaaattagcccagatttagtggcaatgatcggtgcatcagcagcactttcattatca
ggtgtaccttttaatggtcctatcggtgcagcacgtgttggttttattaatgatcaattc
gttcttaacccaacgatttctgagcaagcaatcagccgtttagatttagtggttgctggt
acgcaaaatgcggtattaatggttgaatctgaagcagatattttatcagaagagcagatg
ttagcagcggttgtgtttggtcacgaacaacaacaagtggttatccaaaacatcaatgag
ttagttgcagaagcaggtaaaccttgttgggattggaaagcacctgagccaaatacaaca
ttaatcgaaaaagtaacagcattagcagaatctcgtatcggtgatgcattccgaattatt
gaaaaacaagatcgttatgcaaaaattgatgaaatcaaagcagaggttgttgcacaacta
gcggcagaaatagaaagtgaagaagtttctgaaggtgaaattgttgatattatcacttct
ttggagagtaaagttgtacgtggtcgtgtaattgcgggtgaacctcgtattgacggtcgt
accaaagaaaccgttcgtgcgttagacatttgtactggtgtacttccacgtactcacggt
tctgcaatctttactcgtggtgaaacacaagcattagtagtcgcaacattaggtactgaa
cgtgatgctcaaaatattgatgaattaacgggtgaaaaatcagatcgtttcttattccat
tataatttccctccatattctgtaggtgaaactggaatggttggttcgccaaaacgtcgt
gaaattggtcacggtcgtttagcaaaacgtggtgttttagctgttatgccaagtgcagaa
gaattcccttatgttgtgcgtgttgtttctgaaattacagaatcaaacggttcttcatca
atggcgtctgtgtgtggtgcttcattagcattgatggatgcaggtgtgcctattaaatca
gcggttgcaggtattgcaatgggcttagtgaaagaaggcgatgatttcgtggttctttca
gatatcttaggcgatgaagatcacttaggtgatatggactttaaagtagctggttctcgt
gatggtattacagcattacaaatggatattaaaattgaagggattactcctgaaattatg
cgtattgcattaaaccaagctaaaggtgcgagaatgcacattttaggcgtgatggagcaa
gcaattgcaggtcctcgtgaagagatttcagattttgcaccaagaatttataccattaaa
attgatcctaagaaaatcaaagatgtaattggtaaaggtggtgcaactatccgttcatta
acggaagaaacaggcacatcgattgatattgatgatgatggtactgttaaaattgcagca
atagatggcaatgcagcgaaaagagtaatggctcgtatcgaagaaattacagcagaagtt
gaagtgaatactgtgtatagtggtaaagttactcgcgttgtagattttggggcatttgtc
tctattttaggtggtaaagaagggttagttcatatttctcaaattgcggaagagcgagta
gagaaagtgggtgactatctaacacttggtcaagaagtgaatgtgaaagtcgttgaaatc
gatcgtcaagggcgtattcgcttaacgatgaaaggtgtcgatgctgcatcaacaaccgaa
gagttaccacaagaagaaacagaaactgttttagaagtagaacagacagaagaataa
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