Phocoenobacter atlanticus: KGI96_06240
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Entry
KGI96_06240 CDS
T07499
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
patl
Phocoenobacter atlanticus
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
patl03032
]
KGI96_06240 (gyrA)
03400 DNA repair and recombination proteins [BR:
patl03400
]
KGI96_06240 (gyrA)
Enzymes [BR:
patl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KGI96_06240 (gyrA)
DNA replication proteins [BR:
patl03032
]
Prokaryotic type
DNA Topoisomerases
KGI96_06240 (gyrA)
DNA repair and recombination proteins [BR:
patl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KGI96_06240 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QVE19976
LinkDB
All DBs
Position
complement(1325690..1328371)
Genome browser
AA seq
893 aa
AA seq
DB search
MSELAKDTIPISIEEELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDQSGNTSN
KSYVKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSPAAM
RYTEVRMQKITQQLLTDLDKETVDFSPNYDGKEMIPDVLPTKIPALLVNGSSGIAVGMAT
NIPPHNLNEVLDGCLAYMDNDEITIDELMQHIPGPDFPTAAIINGRKGIEDAYRTGRGKV
YVRAKAEVEINAKGREIIAVTELPYQVNKARLIEKIAELVRDKRLEGISGVTDLSNKDGL
RVEIDVKRDSVGEIVLNNLYALTQMQVTFGINMVALDHGQPKLFNLKQIIEAFVKHRREV
VTRRTIFELRKARSRAHVLEGLAIALANIEPVIELIRASKSKAEAQAALLSRPWELGYVA
GMLESAGVDASRPEDLPEEFGVRDGQYYLSEIQAQAILELQLHRLTGLEHNKIVDEYKAI
LVEIGELLYILNSPERLMEVIREELEAVKAQFGDERRTEITASTADINLEDLITPEDVVV
TLSHTGYVKYQPISDYEAQRRGGKGKSATKTKDDDFVERLLVANTHDTILCFSSRGRLYQ
LKVYQLPQASRGARGTPIVNILPLDKEQNERITAILPIQNGDFSAEKFVVMATASGTVKK
VTLDAFSKVRSNGLIALNLREGDELIGVDITEGDSEIMLFSAQGKVVRFAETAVRAMGRT
ATGVRGMKLALSNIELPEDDNETDVEDETSTVDLKADKIVSLVIPKEEGDILTITENGYG
KRTVLTEYPIKSRNTKGVLSIKVNERNGKVVSAVQVEETDQIMLITDAGTLVRTRVHEVS
LVGRNTQGVRIIRTTTDERVVGLEKVCEIEEDEADTVEKVEATEVEVTETTQE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattagccaaagataccattccaatcagtattgaagaagaattaaaaacctct
taccttgattatgcaatgtcggtaattgttggacgtgcattacccgatgtgcgagatggt
ttaaagcccgtacaccgtcgagtattattttcgatggatcaaagtggaaatacatcaaat
aaatcttatgtaaaatcagcccgtgtggttggggacgtcatcggtaaataccatccacac
ggcgataccgctgtttatgataccattgtacgtatggctcagccattctcattgcgttat
atgttagtggacggacaaggtaactttggttcgattgatggcgactcgcctgctgcaatg
cgttataccgaagtacgtatgcagaaaatcacgcaacaattattaacggatttagataaa
gaaaccgtggatttctcgcctaactatgatggcaaagagatgatccctgacgtactgcca
actaaaattcctgcattattagtgaatggttcatcgggtattgcggtcggtatggcaacc
aatattccgccacacaacttaaatgaagtgttagacggctgtttagcttatatggataat
gatgaaattaccattgatgagctaatgcaacatatcccaggacctgacttcccaacagcg
gcgattatcaatggtcgcaaagggatcgaagacgcttaccgcacaggacgtggtaaagtt
tacgttagagcaaaagccgaagtagaaatcaatgccaaagggcgtgaaattattgcggtc
actgaattaccttatcaagtaaacaaagcccgtttaattgaaaaaattgccgagttagtg
cgtgataaaaggttagaaggtattagtggagtcacggatttatccaataaagacggatta
cgtgttgaaattgacgtaaaacgtgattctgtaggcgaaatcgtattaaacaacctttac
gctttaactcaaatgcaagtcacatttgggatcaatatggttgcccttgatcacggtcag
ccaaaattatttaatttaaaacaaattattgaagcctttgttaaacaccgtcgtgaagtg
gtcactcgccgtacgatttttgaattacgcaaagcacgtagcagagcccacgtattagaa
ggtttagcaattgctttagccaatatcgaacctgtgattgagttaattagagcgtcaaaa
agtaaagcagaagctcaagccgccttgctttctcgtccttgggaattaggctatgttgct
ggaatgctagaaagtgcaggcgttgatgcttctcgccctgaagatttgccagaagaattt
ggggtgcgtgatggacaatattatttatcagaaattcaagctcaggcgattttagaactt
caattacaccgtttaacaggtttagagcataataaaatcgttgatgaatataaagccatc
ttggttgaaatcggcgagttattgtatattttaaatagccctgaacgtttaatggaagtt
attcgtgaagaattagaagctgttaaagcacaatttggtgatgaacgccgtacagaaatt
accgcaagtaccgcggatattaatttagaagatttaatcacaccagaagatgtagtcgtt
actctttctcatacgggttatgtgaaatatcaaccaatttctgactacgaagcacaacgt
cgtggtggtaaaggaaaatccgcaaccaaaaccaaagatgatgacttcgtagaacgtctg
ttagttgcaaatacccacgatacgatcttatgtttctcaagtcgtggacgtttgtatcaa
ttaaaagtgtaccaattaccacaagccagtcgtggagcaagaggtacacctattgtaaat
atcttaccattagataaagaacaaaatgagcgtatcacagcgatcttaccaatccaaaac
ggcgacttctccgctgagaaattcgtagtgatggcaaccgcaagcggcacagtgaaaaaa
gttacccttgatgcgtttagtaaagtccgttcaaacggtttaattgccttaaacttacgt
gaaggtgacgagctaatcggtgtggatattaccgaaggcgacagcgaaattatgttgttc
tcagcacaaggtaaagtggttcgctttgcagaaactgccgtgcgtgcaatgggacgtact
gcaacaggtgttcgtgggatgaagctggcattatctaatatagaattaccagaagacgat
aatgaaacagatgttgaagatgaaacatcaacagttgatttaaaagccgataaaattgtt
tctttagtgataccaaaagaagagggtgatattttaactatcactgaaaatggttatggt
aaacgtactgtcttaacggaatatccaattaaatcacgtaacactaaaggtgtgttatcc
attaaagtaaatgaacgtaatggtaaagtggtttctgctgttcaagtagaagaaaccgat
caaattatgttgattactgatgcgggtacactggttcgtacacgtgttcacgaagtcagt
cttgtgggacgtaatacacaaggggttcgtattattcgaactacaaccgatgaacgagta
gttggactagaaaaagtttgtgaaattgaagaggatgaagcggatacggttgaaaaggtt
gaagcaacagaagttgaagtaacagaaactacacaagagtaa
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