KEGG   Phocoenobacter atlanticus: KGI96_07815
Entry
KGI96_07815       CDS       T07499                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
patl  Phocoenobacter atlanticus
Brite
KEGG Orthology (KO) [BR:patl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:patl03021]
    KGI96_07815 (rpoH)
Transcription machinery [BR:patl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KGI96_07815 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: QVE20253
LinkDB
Position
1620602..1621510
AA seq 302 aa
MSDTQETKLLEAKEKHLPAKRDDFANSMLIPQGNLDSYIRMANQYPVLTAEEEKELAERL
YYDEDIEAAKQLILSHLRFVVHIARGYMGYGLPLADLIQEGNIGLMKAVKRFNPEVGVRL
VSFAVHWVKAEIHEYVLKNWRIVKVATTKAQRKLFFNLRKNKHRLAWFNEEEVKHVANEL
GVQPSDVKEMESRMTGQDMGFDLPTNEDSDEAYVPSMYLEDDNSNFADDIEDEQYSGQAT
AKLAYALATLDERSQEIIKTRWLDDNKATLQDLADKYSISAERVRQLEAAALKKIKQAIT
LE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgagtgatacccaagaaactaaattacttgaagcaaaagaaaaacatttacctgcaaaa
cgtgatgattttgcaaacagtatgttaattcctcaaggtaatttggatagttatattcgt
atggctaatcaatatcctgttttaaccgctgaagaagaaaaagagctagcagaacgctta
tactatgatgaagatattgaagcagcaaaacaattaatcctttctcatcttcgctttgtg
gtacatattgctcgtggttatatgggctatggtttaccactggcggatttaattcaagag
ggcaatattggattgatgaaggcagtaaaacgttttaatcctgaagtaggcgttcgttta
gtttcttttgccgtacattgggtaaaagcagaaattcacgaatatgtactgaaaaattgg
cgaattgtaaaagttgccaccaccaaagcacaacgtaaattattctttaatttacgtaaa
aataaacaccgtttagcgtggtttaatgaagaagaagttaagcacgttgctaatgagtta
ggagtacagccttctgatgtgaaagaaatggaatctcgtatgacgggtcaagatatggga
tttgatttacctaccaatgaagatagtgatgaggcttatgttccttctatgtatttggag
gatgataactctaattttgctgatgatattgaagatgagcaatatagcggacaagcaaca
gccaaacttgcctatgcgttagcgactttagatgagagaagtcaagaaatcattaaaact
cgttggttagacgacaataaagcaacattacaagatttagcggataaatacagtatttct
gcggaaagagtacgtcagctagaagcggcagcactgaaaaaaattaaacaagctattaca
ttagagtag

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