Phocoenobacter atlanticus: KGI96_07975
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Entry
KGI96_07975 CDS
T07499
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGI96_07975 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
patl03019
]
KGI96_07975 (recQ)
03400 DNA repair and recombination proteins [BR:
patl03400
]
KGI96_07975 (recQ)
Enzymes [BR:
patl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KGI96_07975 (recQ)
Messenger RNA biogenesis [BR:
patl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KGI96_07975 (recQ)
DNA repair and recombination proteins [BR:
patl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KGI96_07975 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
SKI
Motif
Other DBs
NCBI-ProteinID:
QVE21893
LinkDB
All DBs
Position
1652801..1654597
Genome browser
AA seq
598 aa
AA seq
DB search
MIKAKNILHSVFGYQSFRTGQQEVIEAVLSNKDCLVIITTGGGKSLCYQVPALCLEGITL
VISPLISLMKDQVDQLLTDGIEAAYLNSTQGFEEQQQIEQKAISGRLKLLYISPEKVMTN
NFYHFISHCKINLIAVDEAHCISQWGHDFRPEYTLLGGLRKTFPNIPLMALTATADPATR
ADIITHLQLNDPHTYLGSFDRPNIRYTIQEKFKPLNQLAKFLDKQQGKSGIVYCGSRKKV
ESITEKLASRGIKVMGYHAGMSVLERSTVQNAFQRDDIQVVVATVAFGMGINKSNVRFVV
HFDLPRSIESYYQETGRAGRDDLPAEAMLFYDPADYGWLQKVLLEKPENEQRKIEQHKLN
TIKDFAESQTCRRLVLLNYFGELRQEPCKNCDICLDPPKKYDGLVDAQKVMSAIYRTGQV
FGLHHIVGVLRGLNNQKIKDHHHDQLSVFGIGKEKNQEYWISVIRQLIHLGLIKQNIMEH
SSLQLTKNARPFLRGEEPLALAMPRLGISSSTILSTKATNRRYDKDLFARLRFLRKQIAD
RENIPPYIVFNDATLQEMAEFTPQTPNEMLAINGVGERKLERFGEAFIQLIKAHLDNR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagccaaaaatattttacatagtgtttttggctaccaatcttttagaactggg
caacaagaagttattgaggcagtattatctaataaagattgtttggttattattaccaca
ggtggaggaaagtccctttgctatcaagtgcctgcactatgcttagaggggatcacctta
gtgatctcacctttaatttcattgatgaaagatcaggtcgatcaacttttaacagacggt
attgaagccgcttatcttaactcaactcaaggctttgaagaacaacaacaaattgaacaa
aaagcaatatctggaagactaaaattactttatatttctccagaaaaagtgatgaccaat
aatttttatcactttatttcccattgtaaaattaatttaattgcggttgatgaagcacat
tgtatttcacagtggggacacgattttcgtcctgaatataccttgcttggcggtttgcga
aaaacctttccaaacataccgcttatggcacttaccgcaacagcggatccagctactcgt
gctgatattattacccatttacagcttaacgatcctcatacttacttgggtagttttgat
cgccctaatattcgttacactattcaagaaaaatttaagccacttaatcagttagccaag
tttttagacaagcagcaaggaaaaagtggcattgtttattgtggtagtcgtaaaaaagta
gagagtattacggaaaaactagcctctcgtggtatcaaggtaatgggctatcacgccgga
atgtcagtgcttgagcgatctaccgtacaaaatgcctttcagcgagatgatattcaagtg
gtcgttgcaacggtagcttttggaatgggaattaataaatctaatgtgcgttttgtggta
cattttgatttacctcgtagtatagaatcttactatcaagaaacagggcgtgcaggacgt
gatgacttacccgcagaggcaatgctattttacgatcctgcggattatggttggctacaa
aaagtcttattggaaaaacctgaaaatgaacaacgtaagatcgaacagcataaactgaat
accattaaagattttgcagaatcacaaacttgtcgccgcttagtattactcaactatttt
ggcgaattacgtcaagaaccttgtaaaaactgtgatatttgtttagatccacctaaaaaa
tacgatggcttagtcgatgctcaaaaagtgatgtctgcaatttatcgaacaggtcaagta
tttggattacaccatattgtgggtgtgcttcgaggcttaaataatcagaaaattaaagat
catcaccacgatcaactttccgtatttggcattggtaaagaaaaaaatcaagaatattgg
atcagtgttattcgccagcttattcatttagggctgattaaacaaaatataatggagcat
tcttcactacaattaaccaaaaatgcacgtccatttttacgaggcgaagaaccacttgct
cttgcaatgcctcgcttaggtatttcaagtagtacgatactatcaaccaaagcaactaat
cgtcgttatgataaagatctgtttgcccgtttacgctttttacgtaaacagattgccgat
agggaaaatattccgccttatattgtgtttaacgatgccaccttacaagagatggcagaa
tttacgcctcaaacccctaatgaaatgttagccataaatggggtcggtgaacgtaaatta
gaacgttttggtgaggcgtttattcagttgattaaagcacatctagataatcgctaa
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