Phocoenobacter atlanticus: KGI96_08185
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Entry
KGI96_08185 CDS
T07499
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl00300
Lysine biosynthesis
patl00470
D-Amino acid metabolism
patl01100
Metabolic pathways
patl01110
Biosynthesis of secondary metabolites
patl01120
Microbial metabolism in diverse environments
patl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KGI96_08185 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KGI96_08185 (dapF)
Enzymes [BR:
patl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KGI96_08185 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QVE20317
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All DBs
Position
complement(1697141..1697965)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVIDGVTQNVYLSPDLIRKWADRRRGIGFDQLLLVEPPYSPELDFHY
RIFNADGTEVSQCGNGARCFARFVNLKGLTNKKEIKVSTAKGKMTLFLQDNGNIRVNMGK
PIWEPAKIPFTANKFEKNYLLLTDIQTAICGVVSMGNPHCVLQVDNVETANVNKLGALLE
SHERFPEKTNVGFMQVLTRNHIKLRVFERGVGETQACGSGACGAVAVGIMQGVLDHSVKV
ELRGGSLQIEWQGEGQDLFMTGSATHIYDGYIHF
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcaaagatgcacggattaggtaatgattttatggtaattgatggggtgaca
caaaatgtgtatctaagccctgatcttattcgtaaatgggctgatcgtcgtcgtggaatt
gggtttgatcaacttttattagtcgagccaccttatagtcctgagttagattttcattat
cgtatttttaatgcagatggaacagaagtctcacaatgtggcaatggtgcaagatgtttt
gcccgttttgttaaccttaaaggattaacaaataaaaaagaaattaaagtcagtacagca
aaaggaaagatgactttatttttacaagataatggtaatatacgagtcaatatgggtaaa
cctatttgggaacctgctaaaattcctttcactgcaaataaatttgagaaaaattattta
cttttgactgacattcaaaccgctatttgtggtgtggtatcaatgggtaatcctcactgt
gtattgcaagtagataatgtagaaacagcaaacgtaaataaattgggtgcattactcgaa
agccacgaacgttttcctgaaaaaacgaatgttggatttatgcaagtacttactcgtaat
catattaagttacgagtttttgagcgaggtgtaggggaaactcaagcctgtggaagtggt
gcttgtggagctgttgcagtaggcattatgcagggtgtgttagatcatagtgtgaaagta
gaattacgaggtggttcactacaaattgaatggcaaggtgaaggacaggatctctttatg
acaggtagtgctacccacatttatgatggttatatccatttttaa
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