Phocoenobacter atlanticus: KGI96_08490
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Entry
KGI96_08490 CDS
T07499
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KGI96_08490 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
patl03019
]
KGI96_08490 (orn)
03009 Ribosome biogenesis [BR:
patl03009
]
KGI96_08490 (orn)
Messenger RNA biogenesis [BR:
patl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KGI96_08490 (orn)
Ribosome biogenesis [BR:
patl03009
]
Eukaryotic type
Pre-60S particles
RNases
KGI96_08490 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Apc13p
Motif
Other DBs
NCBI-ProteinID:
QVE20374
LinkDB
All DBs
Position
complement(1760408..1760968)
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AA seq
186 aa
AA seq
DB search
MSQNNHNLSQQNLIWIDLEMTGLDPQKERIIEIATIVTDKDLNILAEGPVLAIHQSDELL
SKMSDWCVKTHTSNGLVERVKQSKLTERAAELQTISFLKQWVQKGVSPICGNSVAQDKRF
LYRYMPELAEYFHYRHLDVSTLKELASRWKPDILNQFEKKNTHLALDDIRESIEELKFYR
THFIQL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaataatcataatttaagtcagcaaaatttaatttggattgatcttgaaatg
acggggcttgatcctcaaaaggaacgtattattgaaattgcgacgatagtgacggataaa
gatctcaatattttagcggaaggtcctgttcttgccattcatcaaagtgatgagttgtta
agtaaaatgagcgattggtgtgtcaaaacccatacgtcaaacggcttagtagaacgagtt
aagcaaagtaaattaacggaacgtgcagcggaattacaaaccatttcatttttaaaacag
tgggtacaaaaaggggtatccccaatttgtggcaatagcgtggcacaagataaacgtttt
ttatatcgttatatgccagagcttgcagagtattttcactatcgtcatttagatgtaagt
accttaaaagaattagccagtcgttggaaacctgatattttaaatcagtttgagaaaaaa
aatacccatttagctttagatgatattcgtgaatcgatcgaagaattaaaattttatcgt
actcattttatacagttataa
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