Phocoenobacter atlanticus: KGI96_08665
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Entry
KGI96_08665 CDS
T07499
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KGI96_08665 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
patl03021
]
KGI96_08665 (rpoA)
03400 DNA repair and recombination proteins [BR:
patl03400
]
KGI96_08665 (rpoA)
Enzymes [BR:
patl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KGI96_08665 (rpoA)
Transcription machinery [BR:
patl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KGI96_08665 (rpoA)
DNA repair and recombination proteins [BR:
patl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KGI96_08665 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
QVE20404
LinkDB
All DBs
Position
complement(1794054..1795043)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVNIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQDKDDIVLTLNKSGIGPVIAADITHDGD
VEIVNPEHVICHLTDKNASISMRIRVQRGRGYVPASARIHTQSDDRPIGRLLVDARFSPV
DRIAYNVEAARVEQRTDLDKLLIEMETNGTLDPEEAIRRAATILAEQLAAFVDLRDVHQP
EVKEEKPEFDPVLLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLDNWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagaatttttaaaaccgcacttagtgaacattgaacaaattagt
tcaactcacgcaaaagtgacattagagccactagagcgtggctttggccatacactaggg
aatgcccttcgtcgtatattactttcttctatgccaggttgtgcggttacagaagttgaa
attgatggtgtattacatgaatacagcagcaaagaaggtgttcaggaagatattcttgaa
gtgttactaaatttaaaaggtttagcggtaaaagtgcaagacaaagatgatattgttttg
acactgaataagtctggaattggccctgttattgcagcggacattacacatgatggtgat
gtggaaatagttaaccctgaacacgtgatctgtcatttaacagataaaaatgcgtctatt
agtatgcgcattcgagtacagcgtggtcgaggttatgtaccagcttctgcgagaattcac
actcaaagtgatgatcgtccaattggtcgtttattagttgatgcacgttttagtccagtt
gatcgtattgcttacaatgtggaagcagcacgtgtggaacaacgtacagatttggataag
ctactcattgagatggagactaatggaacattagatcctgaagaggctattcgtcgagct
gcaacaattttagcagagcaattagctgcattcgtagatttacgagatgtacatcaacca
gaagtaaaagaagagaaaccagaatttgatcctgttcttcttcgtccagttgatgattta
gaacttacagttcgttcagctaactgcttaaaagcagagacaattcactatatcggtgat
ttagtacaacgtacagaagtagagttattgaaaacacctaatcttggtaaaaaatcactt
accgaaattaaagatgtgcttgcttctcgtggtttatcactgggtatgcgtcttgacaat
tggccgccagcaagcattgctgaagactaa
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