Phocoenobacter atlanticus: KGI96_08860
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Entry
KGI96_08860 CDS
T07499
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
patl
Phocoenobacter atlanticus
Pathway
patl00550
Peptidoglycan biosynthesis
patl01100
Metabolic pathways
patl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KGI96_08860 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KGI96_08860 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
patl01011
]
KGI96_08860 (mrdA)
Enzymes [BR:
patl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KGI96_08860 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
patl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KGI96_08860 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DnaGprimase_HBD
GIP1_N
Motif
Other DBs
NCBI-ProteinID:
QVE20438
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Position
complement(1824345..1826294)
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AA seq
649 aa
AA seq
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MNVFSQKELASKEVSNGKAEAHLFIRRALIGFLGVLVLTAILFANIYHLQIIDYKTYQTR
SNGNRIKLLPTPPVRGLIYDRKGKVLAQNLTFFGLYIVPEKVNNLKETLQKLKDVVGLTD
KDIEAFHKERRRSSHYTPIILKKDLTEEQIARFAVNQYLFPNIDVQAYFKRYYPYGDALT
HIIGYVAKINDKDQKKLKAEGKYQDYAGMHSIGKRGIEKYYEEQLHGIPGFEEVEINNRG
KVIRKLREKNAIAGSSIQLTLDIDLQRYIVDLLADNKGAVVVLDAKDSSILAMVTNPSYN
NNLFVDGISYDDYEYLLNNPNRPLYSRATQGSYPPASTIKPFMAIAGLTEGIVTPQMTIF
DPGYWIIPNTSRKFRDWKRAGHGQTNLNKAITESSDTYFYQLAFNLGIDKTSKWMKKFGF
GEKTGIDIFEESSAIMPSREWKKKRYKQQWLQGDTVSVGIGQGYWTATPLQLAKALAILV
NNGKVNTPHLMKEIVGVDVMPYQDPLLYDDIKNVPNTFWKASKQGMYSVINSSHGTARKA
FADTPYKVAGKSGTAQVFSLAENQKYDVKELKKELHDHALFISFAPYEDPKVIVSIILEN
AGGGSSNAAPVVRKIMDYIFLESDLFKNLQNLDQKSPLNTPQEGKVSNE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtttttagccaaaaagaattagcatctaaagaagtgagcaacggtaaggctgaa
gctcatctttttattcgtcgagcattaattgggtttcttggtgttcttgtgttaactgca
atattatttgctaatatctatcatttacaaattattgattataaaacctaccaaactcgt
tctaatggaaatagaattaaattattacccactcctcctgttcgaggattgatttatgat
cgtaagggaaaagtactcgcacagaatttaactttttttggattatatattgttcctgaa
aaagtcaataatcttaaagagacattgcaaaaattaaaggatgttgtaggtctaacagat
aaggatattgaagcctttcataaagaacgcagacgttcttctcattatactccgattatt
ttaaaaaaagatttaacagaagaacaaattgctcgttttgctgtaaatcaatatttattt
cctaacattgatgttcaggcttattttaaacgttactatccttatggcgatgcattaacg
catattattggttatgtcgcaaaaataaatgacaaagatcaaaaaaaattgaaagctgaa
gggaaatatcaagattatgcaggtatgcatagtatcggtaagcgtggtatcgaaaaatat
tatgaagagcagctacacggaataccaggatttgaagaagttgaaattaataatagaggt
aaagttattcgtaaattaagggaaaagaatgccattgcaggaagcagtattcaattgacg
cttgatattgatttacagcgttatattgtggatttattagcggataacaaaggggcggtt
gtggtattagatgcgaaagatagtagcatattagcaatggttaccaatccgagttataac
aataatttatttgttgatggtatttcttacgatgattatgagtatttattaaataatcct
aatcgacctctgtatagccgagcaacgcaaggatcttaccctcctgcctcaacaattaaa
ccttttatggcaattgcaggtttaacagaagggattgttacacctcagatgaccattttt
gacccaggatattggataattccaaatactagccgtaaatttagagattggaaacgagca
ggacacggacaaacaaatttaaataaagcaattacggagtcttctgatacttatttttat
caattggcgtttaatttaggtattgataagacatcaaaatggatgaaaaaatttggcttt
ggagaaaagacaggtattgatatttttgaagagtcttctgccattatgccaagtcgtgaa
tggaagaaaaaacgttacaaacagcagtggttacaaggagatacagtctctgtagggatt
gggcagggctattggacagcgacaccattacaacttgccaaagcattagctattttggtg
aataatggtaaagtgaatactcctcacttaatgaaagaaattgtgggggttgatgttatg
ccatatcaagatccccttttgtatgatgatataaaaaatgtacctaatacattttggaaa
gcatcaaaacagggaatgtatagtgttattaattcatcgcatggaactgcgcgcaaggct
tttgccgatacaccttataaagttgcagggaaatctggcactgcacaagtatttagtttg
gcagaaaaccaaaaatatgatgtgaaagagcttaaaaaagaattacacgatcacgcatta
tttattagttttgcaccttatgaagatcccaaagttatcgtttctattattttggaaaat
gcaggaggaggatcaagtaatgctgctccagtcgtgagaaaaataatggattacatcttt
cttgaatcggatttatttaaaaatttgcaaaatttagatcaaaagtcaccgctcaatacc
cctcaagaaggtaaggtttcaaatgaatag
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