Phocoenobacter atlanticus: KGI96_10275
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Entry
KGI96_10275 CDS
T07499
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
patl
Phocoenobacter atlanticus
Brite
KEGG Orthology (KO) [BR:
patl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
patl03016
]
KGI96_10275 (trmA)
Enzymes [BR:
patl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
KGI96_10275 (trmA)
Transfer RNA biogenesis [BR:
patl03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
KGI96_10275 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_15
Methyltransf_4
MTS
Cons_hypoth95
Methyltransf_11
PrmA
TRM5-TYW2_MTfase
Methyltransf_12
TPMT
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QVE20688
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All DBs
Position
2125750..2126841
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AA seq
363 aa
AA seq
DB search
MTLQIEQYPQLFAKKVANLTALLAPFNPPCIEAFESETHHFRLRAEFRIWHNDDDLYHIM
FDQQTKQRYRVDQFPIGSLLINQMMTALLDEIRTNDILRHRLFQVDYLTSLSGQIVVSML
YHKKLDENWTVQAKLLKQNLIQQGFDVQLVGRATKQKIVIDRDYVEEKLTIDNKEYIYRQ
VENSFTQPNAKINIKMLEWARSCTANSEGDLLELYCGNGNFSIALASQFRKVLATEISKS
SVASAQYNIEQNQIDNLQIIRMSAEEFTQALNGVRKFNRLKGIELSDYQCNTIFVDPPRA
GLDQDTLNLVQNYERILYISCNPHTLCENLEQLSQTHRIERCALFDQFPYTDHIESGVWL
LKK
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacactacagattgaacaatatcctcaattatttgcaaaaaaagtggcaaatctgacc
gctttacttgctccttttaatcctccttgtattgaggcttttgaatctgaaactcaccat
tttcgtctacgtgcagaatttcgcatttggcataatgatgacgatctttatcacataatg
tttgatcaacagaccaaacaacgctatcgagtcgatcaatttccgattggtagtctgtta
atcaatcaaatgatgaccgcattattagatgaaattcgcaccaatgacatattaagacat
cgtttatttcaagtggattaccttacatcattaagtggacaaattgtggtgtcaatgttg
tatcataaaaaacttgacgaaaattggacagtgcaagccaaattacttaaacaaaattta
attcaacaaggttttgatgttcaattggtgggacgtgccacaaagcaaaaaattgtgatt
gatcgtgattatgtcgaagaaaaattaaccattgataataaagaatatatttatcgccaa
gtagaaaatagttttactcagcctaatgcaaaaataaatataaaaatgttagagtgggca
agaagttgtaccgcaaatagcgaaggggatttattggaactttattgtggaaatggcaac
ttctccattgcacttgctagccaatttagaaaagtattagcaacggaaatttctaaatct
tctgtggcatccgcacaatataatattgaacaaaatcaaattgataatttacaaattatc
agaatgtcagcggaagaatttacgcaagcgttgaatggagtgcgtaaatttaaccgttta
aaaggaattgagttatctgattatcaatgcaacaccatttttgttgatcctcctcgagca
ggattagatcaagataccttaaatttagtacaaaactatgaaagaattttgtatatttcg
tgtaatccgcatactttgtgtgagaatttagaacaacttagccaaacccaccgtattgag
agatgtgcgttatttgatcaattcccttatacagaccatattgaaagtggggtttggttg
ttgaagaaataa
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