Pectobacterium atrosepticum 21A: GZ59_01040
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Entry
GZ59_01040 CDS
T03293
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GZ59_01040 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pato02000
]
GZ59_01040 (xylF)
Transporters [BR:
pato02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
GZ59_01040 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
GHL6
Motif
Other DBs
NCBI-ProteinID:
AIK12021
LinkDB
All DBs
Position
120699..121697
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AA seq
332 aa
AA seq
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MMKVNHFLLSACAVFTLACQPGFAKDVKIGMAIDDLRLERWQKDRDLFVEQAKKQGADVF
VQSANGNEATQISQIENMINRGVDVLVIIPYNGQVLGNVIAEAKREGIKVLAYDRMINNA
DVDFYISFDNEKVGELQAKYLVDKVPGGNYFLMGGSPVDNNAKLFRQGQMKVLTPLIESG
KIKVVGDQWVDAWLPENALKIMENALTANSNKIDAVVASNDATAGGAIQALAAQGLAGKV
AISGQDADLAAIKRIVAGAQTMTVYKPISKLAKDAADIAVALGAGKTPESNAKLNNGLKD
IPSFLLTPIPVDKSNIDSTIIADGFHKKADVY
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagttaaccattttttactctcagcttgtgccgtattcactttagcttgtcag
cccggattcgcgaaggacgttaaaataggcatggcgattgatgatttgcgtcttgaacgc
tggcagaaagatcgcgatctttttgttgagcaagccaaaaagcagggcgctgatgttttt
gttcaatcagcaaacggcaatgaagctacgcaaatttctcaaatagaaaacatgatcaat
cgcggtgtcgatgtattggttattattccttataacggtcaggtacttggtaatgttatt
gcggaagcaaaacgtgagggaataaaagttcttgcttacgatcgcatgattaataatgcg
gatgtggatttttatatttcatttgataatgaaaaggttggagagctacaggcgaaatat
ctcgtcgataaagtgcccggcggaaactatttcttaatgggcggctcaccggtcgataac
aatgcgaagctgtttcgtcaggggcaaatgaaagtgctcacgccgttgatcgagagtggg
aagatcaaggtcgttggcgatcagtgggtcgatgcctggctaccagaaaacgcgctaaaa
attatggaaaatgcgctaacggcgaacagcaataagattgatgctgtcgttgcgtcgaac
gatgccacggcgggcggggcgattcaggcgctggctgcacaaggattggcagggaaggtg
gctatttccggtcaggatgccgacttggcggcaatcaaacgcattgtggctggggcgcaa
accatgacggtctataaaccgatcagcaagctggcgaaagatgccgcagatatcgctgtg
gcactgggagccggtaaaacgccagagtctaacgctaaactaaacaatgggttgaaagac
attccttccttcttactgaccccaattcccgtcgataaatccaatatcgattccaccatc
attgctgatggtttccacaaaaaagcggatgtgtattaa
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