Pectobacterium atrosepticum 21A: GZ59_06610
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Entry
GZ59_06610 CDS
T03293
Symbol
rafA
Name
(GenBank) alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00052
Galactose metabolism
pato00561
Glycerolipid metabolism
pato00600
Sphingolipid metabolism
pato01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
GZ59_06610 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
GZ59_06610 (rafA)
00600 Sphingolipid metabolism
GZ59_06610 (rafA)
Enzymes [BR:
pato01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
GZ59_06610 (rafA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Spb1_C
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
AIK12535
LinkDB
All DBs
Position
complement(707571..709715)
Genome browser
AA seq
714 aa
AA seq
DB search
MMRDIVQLTSAQCDVIVRCAPAAEILYWGPRLRGFLPEDVASLQRPVANGRLDVDLPLTL
AMEYGRGQFGSPGIEGHRSGYDAAPIFTTTQVDVQGNTLTITADDTQAGLRLTSELRLDP
QTDVLQLRHTLQNLRADAWQVQRLAVTLPVPERASDVMAFHGRWLREFQAHRLTLQHGGF
IQESRRGRSSHEYFPALILGEPAFSEQRGAVWGVHLGWSGNHRLRADIKTDGRRVVQAEA
LYLPGEITLAQSESLTTPWVYAAFSDTGLNGMSQRYHSFLRQSLIQFCGDKPRPVHLNTW
EGIYFDHSPEYIMQMASKAADVGVERFIIDDGWFRGRHHDRAALGDWYLDEEKYPNGLMP
VIEHVKALGMEFGIWVEPEMINPDSDLFRAHPDWVLQLPGYKQPTGRYQYVLNLNQPDAF
AYLLERLSWLLGEHPVDYVKWDMNRELVQPGHEGRLAADAQTRQFYRLLDTLRQRFPHVE
FESCASGGGRIDYGVLERTQRFWVSDNNDALERQTIQRGMSYFFPPEVMGQHIGHARCHA
TYRRHTIAFRGLTALFGHMGIELDPVKADDDELEGYRHYIQLHKTLRPLLHSGTTWRVEM
PDDTVQVTGVVSRDRQHAVFQVAQLRMPDYSLAGTLRFPGLLPDARYEIKLLDGPEIKTV
REGGSTMRELPPWLRQPLVVSGDWLMQAGLALPVLTPETAILVELSAVPESAGR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtgatattgttcaattaaccagtgcgcagtgcgatgtcatcgtgcgttgcgcg
ccagcagcagaaattctctattgggggccacggctacgcggctttttgccagaagatgtc
gcttctctgcaacgccccgtcgccaatggtcgtctggatgtcgatctccccctgacgctg
gcgatggaatatgggcgtggccagttcggttcgccaggtattgaaggccatcgttcaggt
tacgacgccgcgccaatcttcacgaccacgcaggttgatgttcaaggcaacacgctcacc
atcacggcagacgacacgcaggctggccttcgcctgaccagcgaactgcgactggatccg
cagaccgatgtgctacaactgcgccacacgttacagaatctgcgcgctgacgcctggcaa
gtacagcgtcttgccgtcacgctgcccgtccctgaacgggcgagcgatgtcatggcgttt
cacggtcgctggctgcgtgagtttcaggctcaccgcctgacgttgcagcacggcggtttt
attcaggaaagccgtcggggaagaagttcacacgaatatttccctgccctaattctcggc
gaacccgcatttagcgagcaacgtggggccgtctggggcgtgcatttaggctggagcggc
aaccaccgtttgcgtgccgatatcaaaaccgacggacgtcgcgtcgtacaggcagaagcc
ctttatctgccgggcgaaatcacgctggcacagtcggaatcgctcacgacaccatgggtc
tacgcggcgttctccgacactggcctgaacggcatgagccagcgttatcactccttctta
cgccaatcgctgatccaattctgcggcgataagccccgcccggtgcacctcaatacgtgg
gaagggatctatttcgatcactccccagagtacatcatgcagatggcgagcaaagccgcc
gacgtcggcgtagagcgcttcattatcgacgacggctggttccgcgggcgtcatcacgac
agggccgcgctcggcgactggtatttggacgaggaaaagtaccctaacgggctgatgcca
gtcattgagcatgtcaaagcactggggatggaattcggcatttgggtcgaaccggagatg
attaaccccgattccgatctgtttcgcgcccatcccgactgggtgctgcaattgcccggc
tataagcagcccacaggccgctaccagtatgtgttgaatttaaaccagcccgacgctttc
gcttatttactggaacggctgagctggctgctgggcgaacaccctgtcgattatgtcaaa
tgggatatgaaccgcgaactggtgcaacccggccatgaaggacgtctggccgccgatgcg
caaacccggcagttctatcgcctgctcgataccctgcgccagcgttttccccatgtcgaa
tttgaatcctgcgcctccggcggcggccgcatcgattatggcgtgctggagcgcacccag
cgtttctgggtatcggataacaacgacgcgctggagcgtcagaccatccaacgcggtatg
agctacttcttcccgccagaggtgatggggcaacacatcggacacgcccgctgccacgcc
acgtatcggcgtcacactatcgcgtttcgcggcctgaccgccctgttcggccatatggga
atcgagctcgatcctgtcaaagccgatgatgacgagctggaaggctatcgccactatatc
cagttgcataaaacgctgcgcccgctgctgcacagcggcacaacctggcgggtcgagatg
ccggacgatacggtgcaagtcaccggcgtggtgagccgcgatcgacagcatgccgttttc
caggtagcccagttgcgaatgccagattattcgctggcaggcacgcttcgcttccctggc
ctgctgcctgacgcacgttatgaaatcaaactgctggacggcccggaaatcaaaacggtg
cgcgaaggtggcagcaccatgcgtgaacttcccccttggttacgccaaccgctggtcgtt
tccggcgattggctaatgcaggccggtcttgccctccctgtcctgacgccagaaaccgcc
attctggtcgagctttccgcggtgccggagagcgctggcagataa
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