Pectobacterium atrosepticum 21A: GZ59_07120
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Entry
GZ59_07120 CDS
T03293
Symbol
rhiE
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pato
Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GZ59_07120 (rhiE)
Enzymes [BR:
pato01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
GZ59_07120 (rhiE)
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
RhgB_N
CdAMP_rec
Motif
Other DBs
NCBI-ProteinID:
AIK12584
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Position
771867..773597
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AA seq
576 aa
AA seq
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MKRSVLLLVGATLAPYSYSAQDNAVSLSVSGLNTVLDNGLLKATFGEDGSAVSMVTGGNN
IVTNLSGAARDPSKTRSAYLDYYINNGNVKGVKDFTPERVEVLRNDREMAHVAYIDDRGG
LLKLEYHLIMRRGVSGLYSYVVAENSGSQDVNVSELRNVYRFDPARLDHLYSGVRQGKPL
LYSQLEASPKVQDETWRLPDGSIYSKYDFAGYMRTAPFWGVFGNGVGAWLIHGNREYFSG
DALKQDLLVHQDAIILNYMTGSHFGTPDMAAQPGWKKFYGPWLLYINQGDTEQMLADAQR
QALTETVSWPYKWVSDSRYPIDRTQVSGRVASQQSVTVVLSSSLDEPFDVQTRGYSYQAT
IDSKGNFAIPHVRPGNYHLAVYANSGTQPGILVEQTLSVSGDKQVLPMITLPKAESVVWA
IGQANRQASEFRFGNEARNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQ
PEKKTYFLNIALAAASNSGMSEPTVPQLAVMVNGTMLETLTYDNDKAIYRGALQSGRYHV
ARIPVSSGFLKKGNNTITLQLKGGSVMYDVVTLSEE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgatctgtcttgttgttggtgggtgccacgctggcaccctatagctatagtgcg
caggataatgccgtgtcgttatccgtttccggtttgaataccgttctggataacggcttg
ctaaaagccacattcggggaggatggcagcgcggtgagcatggtgacgggcggcaataat
attgtcactaacctgtccggtgcggcacgcgatccgagcaaaacgcgtagcgcttacctc
gattactatatcaataatggcaatgttaaaggcgtcaaagatttcactcccgagcgcgtg
gaagtgctgcgtaacgatcgtgagatggcgcatgtggcctatatcgacgatcgaggcggg
ttgttaaagctcgaatatcatctgattatgcgtcgtggcgttagcgggctttatagctat
gtggtggccgaaaatagcggaagtcaggatgttaacgtcagtgaactgcgtaatgtctat
cgcttcgatcctgcacggttagaccatctctacagcggcgttcgtcagggtaagccgctg
ctctacagccagcttgaagcctcgccaaaggtgcaggatgaaacctggcgactgccggat
ggcagcatctattccaaatatgacttcgctggttatatgcggaccgcgcctttctggggt
gttttcggcaatggcgtgggcgcatggttgattcacggcaaccgagagtatttctccggt
gatgcgctcaagcaggatttgttggtgcatcaggatgcgatcattctgaactatatgacg
gggtcgcactttggcacgccggatatggcggcacaaccgggctggaaaaaattctatggc
ccatggctgctgtacattaatcagggcgataccgaacagatgctggcggatgcccagcgt
caggcgctgacggaaacggtcagttggccgtataaatgggtgagcgattcccgttatcct
atcgatcgcacgcaggttagcggacgcgttgccagccagcagtcagtcactgttgtgctt
tcatcatcattggatgagccatttgatgtgcagacccgcggctattcgtatcaggcaacg
attgactcgaaggggaattttgccattcctcatgtccgaccgggtaattaccatctggcc
gtgtacgctaacagcggtacgcagccggggatattggtggagcaaacgctgtccgtttct
ggtgataagcaagtactgccgatgataacgctgcctaaagccgaatcggttgtctgggcc
atcggacaggcaaatcgacaggcgagcgaatttcgttttggcaatgaggcacgcaacacc
cgctggcagcatgaggttcctgcaaatctgacgttcgatattggccgcagcgactatcag
cgcgactggtattacgcgcagaccaaaccgggaaaatgggatatccgcttcgcgctacaa
cctgagaagaaaacctatttccttaacatcgcactggcggcagccagcaacagcggcatg
agcgagccaaccgtgccacagttggcggtaatggtaaacggcaccatgctggagacacta
acttacgacaacgataaagccatctatcgcggtgcgctacagagcggtcgctatcacgtt
gcgcgtatccccgtgtcatccggtttcctgaaaaaaggcaacaacacaatcacgctgcaa
ttaaaaggcggcagcgtgatgtatgacgtggtgacgttaagcgaggagtaa
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