KEGG   Pectobacterium atrosepticum 21A: GZ59_07180
Entry
GZ59_07180        CDS       T03293                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pato  Pectobacterium atrosepticum 21A
Pathway
pato02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pato00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GZ59_07180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pato03021]
    GZ59_07180
Transcription machinery [BR:pato03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GZ59_07180
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like HTH_23 Sigma70_ECF GerE HTH_28 HTH_11 Phage_antitermQ
Other DBs
NCBI-ProteinID: AIK12590
LinkDB
Position
782309..782833
AA seq 174 aa
MKSPAAACPHQPETLNVQQIYHDHHAWLQAWLRRRLGCSQQAADLAQDTFLRLICQHQTD
HIREPRAWLTTVAHGLVVNHWRRKDIENAYLQVLAEQEFNFSPSLELQAIVVDALLAIDQ
MLAMLPVKVRQAFLLVHLDGLTYRQVAEKLAVSERMVKKYMAQAMLNCLLCQDL
NT seq 525 nt   +upstreamnt  +downstreamnt
gtgaagagtcccgccgctgcctgccctcatcagcctgaaaccttaaatgttcagcagatt
tatcatgaccatcatgcctggttacaggcatggttgcgtcggcgtttgggatgttcacag
caggcggcggatctggcgcaagacacgtttctacgtttgatttgccaacatcagaccgat
cacattcgtgaaccgcgtgcctggctgacgaccgtggcccacgggctagtggttaaccac
tggcgacgtaaagacattgagaatgcctaccttcaggtgctagctgagcaagagtttaac
ttttccccttcgctggagctgcaggccatcgtggtggatgcgttgctggccatcgaccag
atgctggcgatgctgcctgttaaggtgcgtcaggcattcttgctggtgcatcttgacggc
ttgacctatcggcaggttgctgaaaaattagccgtttccgagcggatggtaaaaaaatat
atggcacaggcaatgctgaattgtctattgtgtcaggacttatga

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