Pectobacterium atrosepticum 21A: GZ59_07180
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Entry
GZ59_07180 CDS
T03293
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GZ59_07180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pato03021
]
GZ59_07180
Transcription machinery [BR:
pato03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GZ59_07180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Sigma70_ECF
GerE
HTH_28
HTH_11
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AIK12590
LinkDB
All DBs
Position
782309..782833
Genome browser
AA seq
174 aa
AA seq
DB search
MKSPAAACPHQPETLNVQQIYHDHHAWLQAWLRRRLGCSQQAADLAQDTFLRLICQHQTD
HIREPRAWLTTVAHGLVVNHWRRKDIENAYLQVLAEQEFNFSPSLELQAIVVDALLAIDQ
MLAMLPVKVRQAFLLVHLDGLTYRQVAEKLAVSERMVKKYMAQAMLNCLLCQDL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagtcccgccgctgcctgccctcatcagcctgaaaccttaaatgttcagcagatt
tatcatgaccatcatgcctggttacaggcatggttgcgtcggcgtttgggatgttcacag
caggcggcggatctggcgcaagacacgtttctacgtttgatttgccaacatcagaccgat
cacattcgtgaaccgcgtgcctggctgacgaccgtggcccacgggctagtggttaaccac
tggcgacgtaaagacattgagaatgcctaccttcaggtgctagctgagcaagagtttaac
ttttccccttcgctggagctgcaggccatcgtggtggatgcgttgctggccatcgaccag
atgctggcgatgctgcctgttaaggtgcgtcaggcattcttgctggtgcatcttgacggc
ttgacctatcggcaggttgctgaaaaattagccgtttccgagcggatggtaaaaaaatat
atggcacaggcaatgctgaattgtctattgtgtcaggacttatga
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integrated database retrieval system