Pectobacterium atrosepticum 21A: GZ59_10280
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Entry
GZ59_10280 CDS
T03293
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GZ59_10280 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pato03400
]
GZ59_10280 (recC)
Enzymes [BR:
pato01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GZ59_10280 (recC)
DNA repair and recombination proteins [BR:
pato03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GZ59_10280 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIK12890
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Position
1100801..1104199
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AA seq
1132 aa
AA seq
DB search
MFRIYHSNQLDILKRLMVELIKRQPLVDPFQQEVILVQSPGMAQWLQIELATDFGIAANI
QFPLPGVFLWNMCRHVLPDIPKESAFSKDAMTWKLMHLLPDLLAQPDFSALNHYLQDDDN
QRKLHQLAGRVADLFDQYLIYRPDWIKAWQEGKQVDDLGGNQLWQSALWRALVDYTRELA
QPEWHHAILYQRFIHALEQAKTCPKGLPPRVFICGISALPPIYLQALNALAQHIDVHLLF
TNPCRHYWSDIQDYKFLAKLKARNRRLHRFDREQFDETRPLFRDLSQAETLFNDDGKQSI
NNPLLASWGKLGRDNLYLLAELDNVQEIDAFVESDGENLLQTLQRDILELEDHAIVAVSH
ETQNTSAQKRRLEPDDRSIDFHACHSPQREVEVLHDRLLAMMADDPDLMPRDVIVMMADI
DSYTPFIQAVFGNAPDNRYLPFAISDQRARHAHPALQAVISLLDLPTSRFTAEQVLALLE
VPALAARFGIQEEGLRRLRLWVVESGVRWGLDDDNVRDLMLPPTGQHTWRFGLTRMLLGY
AMDSQVGDWQGVLPYDESSGLIAELAGQLAELLMQIHQWRQRLSQPRLLVDWLPLCRELI
ETFFDADSETEAALALVEKQWQHVIGMGTMAYYPQQVPISRLRDELSRRLDQERLSQRFL
AGAINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMGRKIKRGDRSRRDDDRYL
FLEALLSAQHKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSYVLPGDEALDIDSSAEC
VVKHLCREHSRMPFDAHNFLPTPQPLSFAAEWLAAANRKGEAQPDFDREALSERSSDSDV
SLDDLKRFYRHPVRAFFQLRLGVSFMLHSDELLDEEPFVVDSLNRYQLNSELLNTLINEG
DTEKLYRRARSAGELPYGAFGEIYWQEQQQDMAQLAARVRDELTPSLSVSREVDILLDGV
RVSGWLNQVQPDGLLRWRPGTLSMKDGITLWLEHLAYCATGGQGESRLYGREDTAWRFAA
LSEAQAREHLSVMLDGYRQGMSKPLLLLNKAGSAWLAECYDRESDSLRSDEEAQNKARAR
LLQAWQGNMGMRGEGEDYYLQRIIRELDEKRMNEVIEAAQIWLLPPFRSNLA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatctatcactccaatcagttggatatcttgaaaagactgatggttgagctg
ataaaacgtcagccgcttgtggatcctttccagcaggaagtgattttggtacaaagcccg
gggatggcgcagtggttgcaaattgaactggctacggactttggcattgctgccaatatt
caattcccgctgcccggcgtttttttgtggaatatgtgtcgccatgtgctgccggatatt
ccaaaagaaagcgccttcagcaaggatgcgatgacgtggaaactcatgcatttgctgccc
gatttgttggcacagcctgatttttcagcacttaatcactatttgcaggatgatgataac
cagcgcaagttgcaccaacttgccggacgcgtggcggatcttttcgatcaatacctgatt
tatcgccctgattggattaaagcatggcaagaggggaaacaggttgacgatctcggtggt
aaccaactgtggcaatcggcgctgtggcgcgcgctggtggattacacgcgtgaactggcg
cagcccgaatggcaccatgcgattctataccaacgttttattcatgcattagaacaggca
aaaacatgtcctaaaggtctgccgccacgcgtttttatctgcggtatctccgcgttacct
ccgatctacttacaggcgttgaacgcactggcgcagcacattgatgtgcatctgttattt
accaatccctgccgccattactggagtgacattcaggattataaatttctggcgaagcta
aaagcccgcaaccgccgcttacatcgctttgaccgcgagcagtttgatgagactcgcccg
ctatttcgcgatctttcacaggcagaaacgctgttcaatgacgacggtaaacagtcgatc
aataatccgctgctggcatcgtggggcaagctggggcgcgataacctgtatctgctggcc
gaattggataacgttcaggaaatcgatgcctttgttgagtcggatggcgaaaacttactg
caaactttgcagcgcgacatccttgagttggaagatcatgcgatcgtagcggtaagccac
gagacacagaacacaagcgctcagaaacgccgtctggaacccgatgaccgttcgattgat
tttcatgcctgccatagtccgcaacgtgaggttgaagtgcttcacgatcggctgttggcc
atgatggcagacgatcctgatctgatgccgcgcgatgtgatcgtgatgatggcggacatc
gacagctataccccctttattcaggccgtgtttggcaacgcgccggacaaccgctatctg
ccttttgccatctccgatcagcgtgcgcgacatgcgcatcctgcgttgcaggcggtgatc
agtctgttagatttgcccacaagtcgttttacggcggagcaggttttagcgttgcttgaa
gtccctgcgttggctgcccgtttcggtattcaagaagaagggctacggcgtctgcgccta
tgggtggtggaatcgggcgtgcgctggggattggatgacgacaacgtacgcgatctgatg
ctaccgccaacaggccagcatacgtggcgttttggcctgacgaggatgctgctgggctat
gcaatggatagccaggttggcgactggcagggcgtgctgccttatgatgaatccagcggg
ctgattgcggagctggctggtcaactggccgaactgctgatgcagattcatcaatggcgc
cagcgcctgtcccagccacgtttgcttgtcgattggttaccgttatgccgagagctgatc
gaaaccttctttgatgcggatagcgagaccgaagcggcgctggcgctagttgaaaaacag
tggcagcacgtgattggtatgggcacgatggcgtattatccgcaacaggtgccgatctct
cggttacgtgatgaactgtcacggcgtctcgatcaagagcgactcagccagcgttttctg
gccggtgctatcaacttttgtacgctgatgcctatgcgttccatccccttcaaggtcgtg
tgtttactgggcatgaatgatggcgtttaccctcggacgctgccaccacttgggttcgat
ctgatggggcggaaaatcaagcgcggtgaccgtagccgacgtgacgatgaccgctatctg
tttcttgaagcgctcctgtcggcacagcataaactttatatcagctatatagggcgctct
attcaggataatacgcgccgctatccttcagtattggttagcgaactgacggaatatatc
gcgcagagctatgtcctgccgggcgatgaagcgctggatatcgatagcagcgcggaatgc
gttgtaaagcacctctgccgtgagcatagccgtatgccttttgatgcgcataacttcttg
cctacaccgcagccgttaagttttgcggcagagtggctggcggcggcgaatcgaaaaggg
gaagcccagcctgattttgatcgtgaagcgctgtccgaaagatcaagtgatagcgatgtc
agtttggacgatctgaagcgtttttatcgccaccctgtgcgagccttttttcaactgcgg
cttggcgtgagttttatgctgcacagtgacgaactattggatgaagagccttttgtggtt
gatagcctcaaccgctatcaattgaatagcgagctgcttaataccttgattaatgaaggc
gatacggaaaagctgtaccgtcgcgccagatctgcgggcgaattgccctacggcgcgttt
ggcgaaatttactggcaggaacagcagcaggatatggcgcagctagccgcgcgtgtgcgt
gatgaattaacgccgtcgctgtcggtgagccgggaagtggatatcctccttgatggcgtg
cgcgttagcggctggctgaatcaggttcagccggatggtttgctgcgctggcgtcccggt
acgctttccatgaaggatggcattacgctgtggctggaacatctggcctattgtgcaacg
ggtgggcagggggaaagtcggctgtatgggcgggaagacaccgcgtggcgctttgccgcg
ttgtcggaagcgcaggccagagaacatctgagcgttatgctggatggatatcgtcaggga
atgagcaagccgctgttactgctcaataaagcagggagcgcgtggctggctgaatgttat
gatcgtgaaagtgatagcctgcggtcagatgaagaggcgcagaataaggcgcgcgcccgc
ttgctgcaagcctggcagggcaacatgggaatgcggggggaaggtgaggattattacctg
caacgcattattcgtgagttggatgaaaaacgaatgaatgaggtgattgaagcggcgcaa
atctggctactgccaccgttccgctctaatctggcttga
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