Pectobacterium atrosepticum 21A: GZ59_12300
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Entry
GZ59_12300 CDS
T03293
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pato
Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pato03032
]
GZ59_12300 (gyrA)
03400 DNA repair and recombination proteins [BR:
pato03400
]
GZ59_12300 (gyrA)
Enzymes [BR:
pato01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GZ59_12300 (gyrA)
DNA replication proteins [BR:
pato03032
]
Prokaryotic type
DNA Topoisomerases
GZ59_12300 (gyrA)
DNA repair and recombination proteins [BR:
pato03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GZ59_12300 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AIK13079
LinkDB
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Position
1344833..1347472
Genome browser
AA seq
879 aa
AA seq
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MSDLAREITPVTIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSRIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDENISLEGLMEHITGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILAAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAEAWELGSV
ATMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKD
LLAEIAELLYILNNPERLMEVIREELEAIKTQYSDERRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGRGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNDGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG
VRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVSEYPTKSRATKGVISIKVSERN
GKVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEHVVGLQRVA
EPVEDEELDGVVSVEGEIAEDDDAIDDIDGDDDIAEDDE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtcactattgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgtcggacgtgcattgccagatgttcgagatgga
ctgaaaccggtacaccgccgcgtactgtacgcaatgagcgtactgggtaacgactggaac
aaaccgtataaaaaatccgcccgtgtcgtcggggatgtcatcggtaaataccacccgcac
ggtgattctgccgtttatgaaaccatcgtgcgtatggcgcagcctttctcactgcgctac
atgctggttgatggtcagggcaacttcggttcgattgacggcgactctgctgcggccatg
cgttataccgaaattcgcatgtcgagaattgctcatgaactgctggccgatctcgaaaaa
gagacggtcgattttgtgccgaactatgacggcaccgagcagattcctgatgtcatgcct
acgcgtgttcccaacctgctgattaacggttcttccggtatcgccgtcgggatggcaacg
aacatcccaccgcataacctgacagaagtcgtgaacggctgtctggcgtatatcgacgat
gagaacattagccttgaagggttaatggagcacatcacaggccctgatttcccgacggcg
gcaatcatcaatggccgacgcggcattgaagaagcctatcgtaccgggcgcggcaaaatt
tacatccgtgcgcgtgccgaagttgaagcggacgcgaaaactgggcgtgaaaccattatc
gtgcatgaaattccgtatcaggtgaacaaagctcgcctgatcgagaaaattgccgaactg
gtcaaagataaacgtattgaaggcattagcgcactgcgtgacgaatccgataaagacggt
atgcgtatcgttatcgagattaagcgtgatgccgtgggcgaagtggtcctgaataatctg
tactctcagacgcagcttcagacgtcattcggcatcaacatggtggcactgcatcagggc
caaccgaagatcatgccgctgaaagacattctggctgcgtttgtgcgccaccgccgtgaa
gtggtgacgcgccgtaccatttttgaactgcgtaaagcccgtgaccgcgcccatattctg
gaagggttggcgattgcgctggcgaacatcgatccgattatcgaactgattcgtcgtgct
gcgtcacctgctgaagcgaaagcttcactgatcgcagaagcatgggaattgggcagtgtt
gctaccatgctggaacgtgcgggcgatgatgctgcgcgtccagagtggctggagccagag
ttcggcatccgtgacggtcgttactacctgacggaacagcaggcgcaggcgattctggat
ctgcgtttgcagaaactgaccggtatggagcacgaaaagctgctggatgaatataaagac
ctgctggcggagatcgccgagctgctttatatcctcaataatcctgagcgcctgatggaa
gtgatccgcgaagagctggaagcgatcaaaacgcagtacagcgacgagcgccgcacagaa
atcacggcaaacacctctgacattaacatcgaagacttgatcaatcaggaagatgttgtt
gttacgctgtctcaccagggttatgtgaagtatcagccgctgagcgactacgaagcacaa
cgtcgtggtggccgtggcaaatctgcagcccgtattaaagaagaagactttatcgatcgc
ctgctggtggccaacactcacgatacgatcctgtgcttctccagccgtggccgtctgtac
tggatgaaggtgtatcaattaccggaagccagccgtggcgcacgtggtcgtcctatcgtc
aacctgttgccgcttgaaccgaatgagcgtatcactgcgattctgccggtacgtgagtac
gaagaaggccgccacatcttcatggcaaccgcgagcggtacagtgaagaaaacggcgctg
acggaattcagccgtccgcgtagcgcggggatcatcgcggttaacctgaacgacggtgac
gagctgattggcgtcgacctgaccgatggcagcgatgaagcgatgctgttctcagcggaa
ggtaaagtggttcgcttctccgaacaggcggtgcgttccatgggtcgtacggcaacgggc
gtccgtggtatcaatctgcaaggtgaagatcgcgtcgtttcgctgattatccctcgcggc
gagggtgatatcctgaccgtcacgcaaaatggcttcggtaagcgtactgccgtgagtgag
tacccaactaagtcgcgtgcgacgaaaggggttatctctatcaaggtcagcgagcgtaac
ggtaaagtggttggtgcggttcaggttgataccgcagaccagatcatgatgatcaccgat
gcgggaacgctggtgcgtacacgcgtatctgaagtcagcatcgttggccgtaacacacag
ggtgtgacgctgattcgtacagcggaagacgaacatgttgttggcctgcaacgcgttgct
gaaccggtagaagatgaagagctagatggcgtggtaagcgttgaaggcgaaatcgctgaa
gacgatgatgctatcgacgacattgatggcgatgatgatatcgctgaagatgacgaataa
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