Pectobacterium atrosepticum 21A: GZ59_13910
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Entry
GZ59_13910 CDS
T03293
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00020
Citrate cycle (TCA cycle)
pato00190
Oxidative phosphorylation
pato00650
Butanoate metabolism
pato00720
Other carbon fixation pathways
pato01100
Metabolic pathways
pato01110
Biosynthesis of secondary metabolites
pato01120
Microbial metabolism in diverse environments
pato01200
Carbon metabolism
Module
pato_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pato_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pato_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GZ59_13910 (sdhA)
00650 Butanoate metabolism
GZ59_13910 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
GZ59_13910 (sdhA)
00720 Other carbon fixation pathways
GZ59_13910 (sdhA)
Enzymes [BR:
pato01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GZ59_13910 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
Thi4
FAD_oxidored
FAD_binding_3
BEX
Motif
Other DBs
NCBI-ProteinID:
AIK13232
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All DBs
Position
1518859..1520625
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AA seq
588 aa
AA seq
DB search
MNLPVREFDAVVVGAGGAGMRAALQISQMGLSCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGSIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNNTTIFSEWYALDLVKNQDGAVVGC
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPLQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCEGPWGPHAKLKLDHLGKDVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVSGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSAGIHLR
ESLEEQGESRDASESDIEASLDRMNRWNNTRSGEDPVEIRKALQSCMQNNFSVFREGDAM
AKGLEELKVIRERLKDARLDDTSSEFNTQRIECLELDNLMETAYATAVSANFRTESRGAH
SRFDYPERDDENWLCHSLYLPQTDSMTRREVNMQPKLRAAFPPKIRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgccagtcagagaatttgatgcagtggttgttggtgcgggtggtgcaggaatg
cgcgccgcgctgcaaatctcccaaatgggcctgtcctgtgccctgttatccaaagtgttc
ccaacccgttcccatactgtgtccgcgcagggcggtattaccgttgcgctgggtaacacc
catgaagataactgggaatggcacatgtatgacaccgtaaaagggtcggattacattggc
gatcaggacgcgattgaatatatgtgtaaaaccggcccggaagcgattctggaactggaa
cacatgggattaccgttctcccgtctggatgatggcagtatttatcagcgtccgttcggc
ggccaatccaagaactttggcggtgagcaggccgcacgtaccgcagctgccgctgaccgt
accggccatgcgctgctgcacacgctgtatcagcagaacctgaaaaataacaccactatc
ttctccgaatggtatgccctcgatctggtgaaaaatcaggatggtgctgttgtcggctgt
acggcgatctgtatcgaaaccggtgaagtggtctatttcaaagcgaaggcgaccgtgctg
gcaaccggtggcgcgggccgtatctaccagtccaccaccaatgcgcacattaatactggc
gacggcgtaggtatggcgttgcgtgccggtgttccgttgcaggacatggaaatgtggcag
ttccacccaaccggcattgctggtgcgggtgtgctggtaaccgaaggctgccgtggtgaa
ggtggctatttgctgaataagcacggtgagcgtttcatggaacgctacgcgccaaatgcg
aaagatctggcgggtcgtgacgttgttgcccgttctattatgatcgaaattcgtgaaggc
cgcggctgtgaaggtccgtggggaccgcacgccaagctgaagcttgaccatctgggtaaa
gacgttctggaatctcgcctgccgggtattttggaactgtcccgtacatttgctcacgtc
gatccagtgaaagagccgattcctgttattccaacctgccactatatgatgggcggtatt
ccgaccaaagtaagcggtcaggcgttgacggtgaatgagaaaggcgaggatgtggtgatt
ccagggttgtttgccgtgggtgaaattgcctgcgtatcggtccatggtgctaaccgtctg
ggcggtaactcgctgctcgacctagtggtattcggccgctcggcgggtatccatctgcga
gagtcgttggaagagcagggcgaaagtcgtgatgccagcgaatctgatattgaagcgtca
ctcgaccgcatgaatcgttggaacaatacgcgttccggtgaagatccggttgaaatccgc
aaggcgctgcaatcctgtatgcagaataacttctcggtattccgtgaaggcgatgcgatg
gccaaagggctggaagagctgaaagtgatccgtgagcgcctgaaagacgcgcgtttggat
gatacatcaagcgagttcaacacccagcgcattgagtgtctggaactggataacctgatg
gaaaccgcttacgcaacggcggtttcggctaacttccgtactgaaagccgtggtgcccat
agccgctttgattacccagaacgtgacgatgagaattggctgtgccattcgttgtatctg
ccgcaaaccgacagcatgactcgccgtgaggtgaacatgcagcctaaattgcgtgcggcg
ttcccgccgaaaatacgtacttattaa
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