Pectobacterium atrosepticum 21A: GZ59_13920
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Entry
GZ59_13920 CDS
T03293
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00020
Citrate cycle (TCA cycle)
pato00190
Oxidative phosphorylation
pato00650
Butanoate metabolism
pato00720
Other carbon fixation pathways
pato01100
Metabolic pathways
pato01110
Biosynthesis of secondary metabolites
pato01120
Microbial metabolism in diverse environments
pato01200
Carbon metabolism
Module
pato_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pato_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pato_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GZ59_13920 (sdhB)
00650 Butanoate metabolism
GZ59_13920 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
GZ59_13920 (sdhB)
00720 Other carbon fixation pathways
GZ59_13920 (sdhB)
Enzymes [BR:
pato01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GZ59_13920 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_18
Fer4_9
Fer4_16
Fer4
Motif
Other DBs
NCBI-ProteinID:
AIK13233
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All DBs
Position
1520642..1521358
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AA seq
238 aa
AA seq
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MKVEFSIYRYNPDVDDAPRMQDYQLEAEEGRDMMLLDALMLLKEQDPTLSFRRSCREGVC
GSDGVNMNGKNGLACITPVSALRRGNSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPY
LLNNGKNPPAREHLQSPEQRAKLDGLYECIMCACCSTSCPSFWWNPDKFVGPAGLLAAYR
FLIDSRDTETTPRLDDLDDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKSMLLHRSA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgaattttctatttatcgttataacccggatgttgatgatgctccgcggatg
caggattaccaactggaggcggaagaaggccgcgacatgatgctgctggatgcgctgatg
ttgctgaaagagcaggatccgacgctctcattccgtcgttcctgtcgcgaaggcgtctgt
ggttccgacggcgttaacatgaacggcaaaaacgggctggcctgtattacgccagtttcc
gcgttacggcgcggaaacagcaaaattgttatccgtcctttaccgggattaccggttgta
cgtgatttggtagtggacatgggacagttctatgctcaatatgagaaaataaagccttac
ctgttgaataatgggaaaaatccgccagcgcgtgaacatctgcaatcgcctgaacaacgt
gccaagctggatggattgtatgagtgcattatgtgtgcctgctgctcaacgtcttgccca
tcgttctggtggaacccagacaaatttgttgggcctgctgggttattggccgcgtaccgt
ttcctgattgacagtcgtgatacggaaactacgccacgacttgacgatctggacgatgcg
ttcagcgtcttccgctgccacggcatcatgaactgcgttagcgtttgtccgaaagggttg
aacccgaccaaggctattggtcatattaaatcgatgttgctgcaccgcagcgcgtaa
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