Pectobacterium atrosepticum 21A: GZ59_19710
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Entry
GZ59_19710 CDS
T03293
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
pato
Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pato03032
]
GZ59_19710 (ihfB)
03036 Chromosome and associated proteins [BR:
pato03036
]
GZ59_19710 (ihfB)
03400 DNA repair and recombination proteins [BR:
pato03400
]
GZ59_19710 (ihfB)
DNA replication proteins [BR:
pato03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GZ59_19710 (ihfB)
Chromosome and associated proteins [BR:
pato03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GZ59_19710 (ihfB)
DNA repair and recombination proteins [BR:
pato03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GZ59_19710 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AIK13788
LinkDB
All DBs
Position
2166127..2166411
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHIPAKVVEDAVKEMLEQMASTLAEGDRIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaaggcttgctggacagcaatctcatatcccggccaaa
gtggttgaggatgcagtgaaagaaatgcttgaacaaatggcttctacgttagccgaaggc
gaccgtattgaaatccgtgggtttggcagtttttcacttcactaccgtgcaccgcgtgtg
ggtcgtaatccgaaaacgggtgataaagttgagctggaaggtaagtacgtccctcacttt
aaaccgggcaaggaactccgcgaccgcgctaacatttatggctaa
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