Pectobacterium atrosepticum 21A: GZ59_21860
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Entry
GZ59_21860 CDS
T03293
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00061
Fatty acid biosynthesis
pato00071
Fatty acid degradation
pato01100
Metabolic pathways
pato01212
Fatty acid metabolism
pato02024
Quorum sensing
pato04146
Peroxisome
Module
pato_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GZ59_21860
00071 Fatty acid degradation
GZ59_21860
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GZ59_21860
09145 Cellular community - prokaryotes
02024 Quorum sensing
GZ59_21860
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pato01004
]
GZ59_21860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pato04147
]
GZ59_21860
Enzymes [BR:
pato01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GZ59_21860
Lipid biosynthesis proteins [BR:
pato01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GZ59_21860
Exosome [BR:
pato04147
]
Exosomal proteins
Exosomal proteins of breast milk
GZ59_21860
Exosomal proteins of breast cancer cells
GZ59_21860
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Pept_S41_N
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AIK13995
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All DBs
Position
2397145..2398863
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AA seq
572 aa
AA seq
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MPLKKYLGSDVLEKIWLSRYPADVPAEIDPDRYSSLIDMFENNVKRYADRPAFINMGEVM
TFRKLEERSRAFAAYLQNQLKLQKGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYT
PRELEHQLKDSGASTIVIVSNFAHTLEKVVHNTAVEHVILTRMGDQLSTAKGTLVNFVVK
YIKRLVPKYHLPDAISFRRVLQEGRRQQYVRPDIINSDLAFLQYTGGTTGVAKGAMLTHR
NMQANVAQCLAAYGPVLKEGNEWVVTALPLYHIFALTANCLLFFELGGQNLLITNPRDIP
AVVKELKQYPFTAITGVNTLFNALLNNKEFHELDFSTLRLSVGGGASVQRAVAERWEKLT
GKHLLEGYGLTESSPLVAVNPYDLKHYSGSIGLPVASTDVRIIDDNGNDVGPGESGELWV
RGPQVMLGYWQQPAATDDVLKDGWLATGDIVTADDEGFLRVIDRKKDMILVSGFNVYPTE
IEDVISRHPKVSESAVIGVENEVSGEAVKAFVVRRDNSLTKEELITHCRRNLTGYKVPKE
IEFCEDLPKSNVGKILRRELRDDKKAKKDAAA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaaaaaatatctcgggagtgacgtcttggaaaaaatttggttatctcgctat
ccggcggacgtaccggcggaaattgacccggatcgctattcgtcgttgattgacatgttt
gaaaataacgtaaagcgttacgccgatcgacctgcattcatcaacatgggtgaggtgatg
acgtttcgcaagttggaagagcggagccgggcgtttgcggcctatttgcaaaatcagctt
aaattgcagaaaggcgatcgcgtggcgctgatgatgcccaatctgctgcaataccctgtt
gcgctgtttggtgtgctgcgtgcgggtatggtggtcgtcaacgttaacccgctgtatacg
ccacgggaactggaacaccagctaaaagatagcggagccagcaccattgttattgtgtct
aactttgcacatacgctggaaaaagtcgttcataacacggcggtggagcacgttatcttg
acccgcatgggcgaccagctatccacggcaaaaggcactctggttaacttcgtcgtgaaa
tacattaagcgactggtgcccaaatatcatttgcctgatgcaatctcgtttcgtcgcgtg
ttacaggaagggcgacgtcagcagtacgttcggcctgatatcatcaatagcgatctcgcc
tttctgcaatataccggcggcacgacgggcgtggcgaaaggcgccatgctcacgcaccgc
aatatgcaggcgaatgtggcacagtgtcttgcggcttatggcccggtgttgaaggaaggg
aatgaatgggtggtaacggcgttgccgctgtaccatatttttgctttgacggctaactgt
ctgctgttctttgaactgggcgggcagaatctgttgatcaccaatcctcgagatattcct
gcggtggtaaaagaactgaaacagtatccttttactgcgattacgggcgtcaatacgctg
tttaatgcgttgttaaataataaagaattccatgagcttgatttctcgacactgcgatta
tccgttggcggaggcgcgtcggtgcaacgggcagtcgcggaacgttgggagaagctaacg
ggtaaacatctgcttgagggatacgggttaacagaaagctcccccttggtggccgtgaat
ccctacgatctcaaacattacagcggcagtatcgggctgccagtggcctcaacggatgtc
agaatcattgacgataacggcaacgacgttgggccgggcgaatccggtgaactgtgggta
cgcggaccgcaggtgatgttagggtactggcagcagcctgccgccacggatgacgtgtta
aaagacggttggttggcgacaggtgacattgtcacggctgatgatgaaggattcctgcga
gtgatcgaccgtaagaaagatatgattctggtttccggttttaacgtctacccgacggag
attgaagacgtgatcagccgtcatcccaaggtatccgagtcggcggtgattggggtcgaa
aatgaggtttccggtgaggcggtaaaagcctttgtggtcaggcgtgataactcgttaaca
aaagaggaactcattacgcactgtcgtcgtaatcttacgggctataaagtgccgaaagag
atcgaattctgtgaggatctgccaaaatccaacgtcggaaaaattctgcgtcgtgaatta
cgtgacgataagaaggcaaagaaagacgctgctgcctga
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