Pectobacterium atrosepticum 21A: GZ59_24280
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Entry
GZ59_24280 CDS
T03293
Name
(GenBank) periplasmic pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00040
Pentose and glucuronate interconversions
pato01100
Metabolic pathways
pato02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GZ59_24280
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GZ59_24280
Enzymes [BR:
pato01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GZ59_24280
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GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
AIK14225
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Position
2650472..2652178
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AA seq
568 aa
AA seq
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MKRFALSLLAGLVALQASAATPDRLTIVNQYVDNVLAKAGDHYHGQSPTPLLADGVDPRT
GKQMEWIFPDGRQAVLSNFSAQQNLMRVLVGLSNLSGNASYKQRAEAIVKYHFQHYQDES
GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKDATARFIRGFWNAHV
YDWKIMETSRHGKYGQKMGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE
DGALVWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEF
GPTALEGNMMLKGRTSTIYSENALMQIQLGKDLGAEGKELLTWTTDGLKAFAKYAYNASD
NTFRPMLANGKDLSNYVLPRDGYYGKKGTVLKPYAADNSFLLSYARAYTVSPDAELWRVA
RGIAGAQGLGELGSAPGKDVKVDLATKNNDPYALFALLDLYQASKVKDYLSLAEKVGDNM
ISTRYKNGFFMAETNRQYADVDTIEPYALLALEAAVRNQPQSVAPFLNGAGFTEGGYRME
DGSTRVSTRDNELFLLNVGETLKPNNKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttgcgctgtcgctccttgcgggtctggtcgctttacaggccagcgcggct
acaccggaccgtctcaccatcgtcaatcagtatgttgacaacgtgctggcgaaagccggt
gaccattatcacggtcaatcacctacaccactgcttgctgatggcgtcgatccgcgtact
ggcaaacagatggagtggatcttccctgatggtcgtcaggccgtattatccaacttctcc
gctcagcagaacctgatgcgcgtgctggttggactcagcaacctgagcggtaatgccagc
tataagcagcgtgccgaagcgattgtgaagtaccactttcagcattatcaagatgagagc
ggcctgctgatttggggcggtcatcgtttcgttgatttaaaaacgctgcaaccggaaggc
ccgagcgaaaaagagatggtgcatgagctgaaaaatgcttatccctactacgatttgatg
ttcagcgttgataaagacgcaaccgcacgctttattcgtggtttctggaatgcgcacgtt
tatgactggaagattatggaaaccagtcgccacggtaaatacgggcaaaaaatgggcgca
ctctggcaaagcccgttcgaacaacagccgcccttcttcgccaccaaaggcctcagcttc
ctgaatgcgggtaacgacctgatctattccgcatcgctgctctataaatacaataaggaa
gatggcgcgctggtctgggcaaaacgtttagcgcagcagtatgtactgccacgggataag
gctaccggtcttggcgtgtaccagtttacgcaggcgctgaaacgcgatgaaaccactgac
gatgcggatacacattccaaatacggcgatcgcgcccagcgtcagtttggcccagagttc
ggcccgaccgcgttggaaggcaatatgatgctgaaaggacgtaccagcacgatctattct
gaaaatgcgctcatgcagatccaactgggcaaagatttaggtgcggaaggtaaagagttg
ctgacgtggacaaccgacggcctgaaagcctttgctaaatatgcctacaacgcgtccgac
aacacgttccgcccgatgctcgctaacggcaaagatctttccaactacgttctgccgcgt
gacggttactacggtaaaaaaggcaccgtgctcaagccttatgctgcggataattcgttc
ctgctttcatatgctcgcgcctataccgtttcaccggatgccgaactgtggcgtgttgca
cgtggtatcgctggcgcacaggggctgggtgaattaggttcagcgccgggtaaagacgtc
aaagtcgatctcgccaccaagaacaacgatccttatgccctgttcgcgctgctggatctg
tatcaggctagcaaagtgaaagactatttgtcgctggcggaaaaagtgggcgataacatg
atcagcacacgttataaaaatggcttcttcatggccgagaccaacagacagtatgccgat
gtcgataccatcgagccttatgccctgctagcgctcgaagctgcggtacgcaatcagcca
cagtctgttgcaccgttcctgaatggtgcgggcttcactgaaggcggctaccggatggaa
gatggttcaacgcgcgtgtcgactcgcgataatgaactttttctgctgaacgttggtgaa
acactcaaacccaacaacaagaaataa
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