Pectobacterium atrosepticum 21A: GZ59_30840
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Entry
GZ59_30840 CDS
T03293
Name
(GenBank) putative fatty acid oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00071
Fatty acid degradation
pato00280
Valine, leucine and isoleucine degradation
pato00310
Lysine degradation
pato00362
Benzoate degradation
pato00380
Tryptophan metabolism
pato00410
beta-Alanine metabolism
pato00640
Propanoate metabolism
pato00650
Butanoate metabolism
pato00907
Pinene, camphor and geraniol degradation
pato00930
Caprolactam degradation
pato01100
Metabolic pathways
pato01110
Biosynthesis of secondary metabolites
pato01120
Microbial metabolism in diverse environments
pato01200
Carbon metabolism
pato01212
Fatty acid metabolism
Module
pato_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GZ59_30840
00650 Butanoate metabolism
GZ59_30840
09103 Lipid metabolism
00071 Fatty acid degradation
GZ59_30840
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GZ59_30840
00310 Lysine degradation
GZ59_30840
00380 Tryptophan metabolism
GZ59_30840
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GZ59_30840
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GZ59_30840
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GZ59_30840
00930 Caprolactam degradation
GZ59_30840
Enzymes [BR:
pato01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GZ59_30840
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GZ59_30840
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GZ59_30840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AIK14864
LinkDB
All DBs
Position
complement(3359708..3361903)
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AA seq
731 aa
AA seq
DB search
MNDQQPFSVTASPTTEKTSAFSLTIRPDNIGVISIDVPGERVNTLKSEFAEQILSVFELA
RQHATLRGLIFISAKPDSFIAGADITMLNKCSSAEQAENLAKQGQETFEQIAALPFPVVA
AIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLIGLDSALD
LILTGRHLRAGQALRQGLVDEAVPHDILLDTAVEILKKGKRKAVPLGWRSRLLNSPGIRH
LLFKMVKRKTRAKTHGNYPATEKIIQVVRRGIEKGREEGYRHEARAFGKLVMTPESAALR
HLFFATNALKKTSGAASEAKPIHRVGILGGGLMGGGIASVTATRGQLPVRIKDINEQGIN
HALKYNWQLLTKRVQSKRMKPTERQRLMTLISGSTDYRGFEHADIVIEAVFEDLALKRQM
ITEIEDHAAPHTIFASNTSSLPIHQIAEGARRPQLVVGLHYFSPVDKMPLVEVIPHAHTS
AETVATTVALARKQGKTAIVVGDSAGFYVNRILAPYINEAAYCLLEGEPIESIDYALVRF
GFPVGPLALLDEVGIDVATKIVPVLSEELGDRFTSPPAFDAILKDGRKGRKNGKGFYRYN
KTRRFWHSGKEVDSSVYPLLDVTPKAHIDPALISQRAVMMMLNEAARCLDEGVIQCARDG
DIGAVFGIGFPSFLGGPFHYMDRLGMETVVKTLLVLQQQYGDRFAPCECLLTMREGQRTF
YPPAGEDGRTS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcaacagcctttctccgttacagcatcgcctacaacggaaaaaacatctgca
ttttccctcaccattcggccggacaatatcggtgtgatcagcattgatgtccccggcgag
agggtgaacacgctaaagagcgaatttgcagaacagatcctctcggtctttgagttggcg
cggcagcatgcgacgctcaggggactgatttttatttccgccaagcctgattcgtttatt
gctggtgcggatatcaccatgttgaataagtgcagcagcgccgagcaggccgaaaatcta
gccaagcaagggcaggaaacgtttgagcagattgcagcgttacctttccccgtggtggct
gcgattcatggtgcttgtttaggtggtgggctggaattggcattagcctgcgactatcgc
gtttgctcgctggatgaaaaaacggtgcttgggctaccggaagtacagcttggcctcctt
cccggatcgggcggaacgcagcgtttgccacgtttgattggtctggatagcgcactggat
cttattctgacgggtcgccatctccgggcgggtcaggcgctacggcaggggctggtggat
gaggcggttccgcacgatattctgctggatacggcagtcgagattctcaaaaaaggaaaa
cgcaaagcggtgccgctgggctggcgttcgcgtctgctgaacagtccgggtattcgtcat
ttgcttttcaaaatggtgaaacgcaagactcgcgcgaaaacacatggcaactatcccgct
actgaaaagatcattcaggtggtacgccggggaatagaaaaaggccgggaagaagggtat
cggcatgaggcgcgagcgtttggaaaactggtgatgacgccggagtctgccgcactacgc
cacttgttttttgccactaacgcattaaagaaaacctccggtgcggcctctgaggcgaag
ccgatccatcgtgtcggcattctgggtggcgggttaatgggcggagggatcgccagcgtg
acggcaacgcgcgggcagttgcctgtgcgtattaaagatatcaatgagcagggtattaac
catgcgttgaagtacaactggcaattattgaccaagcgcgttcagagtaaacggatgaag
ccgacggagcgccagcgtttgatgacgttgatttccggcagtacggactatcgtggtttt
gaacatgcagatatcgtcattgaagcggtcttcgaagatctggcactgaagcggcaaatg
attacggagattgaagatcatgccgcgccgcataccattttcgcatccaatacctcctcg
ttgccgatccatcaaatcgcggagggcgcgcgtcgtccacaactggttgttggcctgcac
tattttagcccggtagataaaatgccgctggttgaagtcattccccacgcgcacaccagc
gcggagacggttgcgacgacggttgccctggcgagaaagcagggaaaaaccgcgatcgtc
gtgggagacagcgctggtttctatgtgaatcgcatattggcaccttacatcaacgaagcg
gcttactgcctgttggaaggggagccgattgaatcgattgactatgcgctggtgcgtttt
ggtttccccgtcggcccgctagcgctgctggatgaagtcggtattgatgtcgcgaccaaa
attgtaccggtactgagtgaagaactcggcgatcgttttacctccccgccagcgtttgat
gcgatcctgaaagatgggcgcaaagggcgcaagaatggcaaagggttctatcggtacaat
aaaacgcgccgtttctggcactcggggaaagaagtcgacagctcggtttatccgttgttg
gatgtgacaccgaaggcgcatatcgatcctgcattaatcagccagcgtgccgtgatgatg
atgttgaatgaggcggcgcgttgtctggatgaaggcgtgattcaatgtgctcgtgacggt
gatatcggtgcagtatttggcattggtttcccgtctttcctcggcggtccgttccattat
atggatcgtctggggatggaaacggtagtgaaaacgctattggtactgcaacaacagtat
ggcgatcggttcgcaccctgcgagtgtttactcacgatgcgggaaggccagcggacgttc
tatccgccagccggtgaagacggtaggactagttga
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