Pectobacterium atrosepticum 21A: GZ59_32240
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Entry
GZ59_32240 CDS
T03293
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GZ59_32240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pato03400
]
GZ59_32240
Enzymes [BR:
pato01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GZ59_32240
DNA repair and recombination proteins [BR:
pato03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GZ59_32240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF6594
Motif
Other DBs
NCBI-ProteinID:
AIK14999
LinkDB
All DBs
Position
3515776..3517164
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AA seq
462 aa
AA seq
DB search
MSQFPSSAIFTVSRLNQTVRQLLEMEMGQIWLSGEISNLSQPSSGHWYFTLKDERAQVRC
AMFRTSNRRVTFRPQNGQQIIIRATITLYEPRGDYQLLAESMQPAGDGLLQQQFEQLKQR
LAAEGLFDQQFKQVLPSPAKQVGVITSVSGAALHDILQVLQRRDPSLPVIVYPTSVQGAE
APLQIVRAIELANQRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRNREFTRLH
HRLQQQHPQLRLARQQAQLVKLRQRLDDAMQQQLRQTSRRSERLQQRLMQQQPQTRIHRA
QQRLQQLSYQMQSAVDRQLNQNKQKLGVACSRLEGVSPLATLARGYNVTTAPDGKVLKNV
AQITPGETLKTRLQDGWVESQVTTLAPNPSSVKKRRKSSSQS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatttccctcctctgcaatttttaccgttagccgcctgaatcagacggttaga
caactgttggaaatggaaatgggccaaatttggctctccggcgaaatttccaacctttct
cagccctcatccggccattggtatttcacgctgaaagacgagcgtgcgcaggtgcgctgc
gcgatgttccgcaccagtaaccgcagagtgacgttccgcccgcaaaacggccagcagatc
attattcgcgcaaccatcacactgtatgaaccccgtggcgactatcagttgctggcggaa
agcatgcagcccgctggcgacggcctgttacagcaacagtttgaacagctcaagcagcgt
ctcgccgccgaagggctattcgaccagcagtttaagcaagtgctcccctctcccgccaaa
caggtcggtgtgattacgtcagtcagcggtgctgccctgcacgatatcttgcaggtgtta
cagcgccgcgatccgtcactgccggttatcgtgtatcccacatcggtgcaaggggcggaa
gcgccgctacagattgttcgcgccatcgaactggctaaccagagagatgagtgtgatgtg
ttaattgtcgggcgcggtggcggttcgctggaagatctctggagttttaacgatgaacgc
gtagcccgcgctatcttcgccagccgcattcctatcgtcagcgccgtcggccatgaaacc
gatgtcactatcgctgatttcgtgggtgacctgcgcgcgcccacgccgtcggccgctgcc
gagttagtaagtcgtaaccaacttgagctgttgcgccagatccagtcccagcgccagcgt
ctggaaatggcgatggactactaccttgcccagcgcaatcgagaatttactcgtctgcac
catcgcttacagcagcagcatccgcaactgcggctggcacgtcagcaggcccagttggtc
aaactgcgccagcggctggatgatgccatgcagcagcagcttcggcagacttcgcgccga
agtgaacgcttacaacagcgcttgatgcaacagcagccgcagactcgtatacatcgtgca
caacagcgtttacagcaacttagctatcagatgcagagcgcagtggatcgtcagttaaat
caaaataagcagaagctgggcgtcgcctgttcgcgactggaaggcgttagcccgctggca
acgctggcacgcggctataacgtcaccacggcaccggacggtaaggtgctgaaaaatgtc
gcgcaaatcacccccggtgaaacactgaaaacccgcttgcaggacggctgggtggaaagt
caggtcacaacgctggctccaaacccaagttccgtgaaaaagcggcgaaaatcctcatct
cagtcataa
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