Pectobacterium atrosepticum 21A: GZ59_33240
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Entry
GZ59_33240 CDS
T03293
Symbol
cdaR
Name
(GenBank) carbohydrate diacid regulator
KO
K02647
carbohydrate diacid regulator
Organism
pato
Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pato03000
]
GZ59_33240 (cdaR)
Transcription factors [BR:
pato03000
]
Prokaryotic type
Helix-turn-helix
Other families
GZ59_33240 (cdaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
CodY
Motif
Other DBs
NCBI-ProteinID:
AIK15089
LinkDB
All DBs
Position
complement(3630064..3631221)
Genome browser
AA seq
385 aa
AA seq
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MASYHLNAKMAQDIVSRTMQIIDSNINVMDARGKIIGSGDQERLGELHEGALLALSQGRV
VDIDDAVARHLHGVRPGINLPLRIDGEIVGVIGLTGNPSQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLVRTDDLSPALMEWAQRLGIDMNKPRVAAVIEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSHGRWDAEEHRRRVDTLMSRMAE
SSRLRVRLALGNYFAGPGSIARSYRTARTTMSVGKQRMPAQRCYYYQDLMLPVLLDSLRG
GWQANELVRPLSKLKAMDGNGLLRRTLGAWFRNNVQPGATAKALFIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYVALQLDEEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtatcatctcaatgccaagatggcacaggatattgtctcgcggactatgcag
atcattgatagcaatatcaacgtgatggatgctcgcggtaagattatcggcagtggcgat
caggaacgattgggggaactgcacgaaggggcgctgctggcactctcgcaggggcgggtt
gtcgatattgatgacgcggtggcgcgccacctacatggcgtgcggccgggtatcaattta
cccctgcgcatcgacggtgaaatcgtcggtgttatcggtttgacggggaaccctagccag
ttacgccaatacggcgagcttgtctgcatgacggcggaaatgatgctggagcaggcgagg
ctgttgcatatgctggcacaggacagccgtctgcgggaagagctcgtgttgaacctggtc
cgtaccgacgatctgtcccctgctctcatggagtgggcgcagcgtttaggtatcgatatg
aataaaccccgtgttgcagcggtgatcgaagtggacagcgggcagcttggcgtagattcg
gcaatggcagaactacagcagttgcagacgctgctgactacgccagagcgtgacaacctg
atcgctatcgtttccctgacggaaatggtggtactaaaaccggcgctgaatagccatggg
cgttgggatgcggaagaacatcgcagacgcgtggatacgctgatgtcgcgcatggcggaa
agcagtcggctgcgggtgcgactggcgctggggaactattttgctggccccggcagtatc
gcgcgttcttatcgtacggcgcgcacgacaatgagcgtaggcaagcagcgaatgcccgca
cagcgttgttattactatcaggatctgatgttgcctgtgctgttggacagcctgcgtggt
ggatggcaggcaaacgaactggtgcgtccgctctcgaagctcaaggcaatggatggcaat
ggtctgttgcgccggacgctaggtgcctggttccgtaataacgtgcaacccggtgcgacg
gcaaaagcgctgtttattcaccgcaatacgctagagtatcgccttaatcgtatctctgaa
ctgacgggcttggatttggggaattttgacgatcgtctgctgctgtatgtagccttgcag
ctggatgaagaagagtag
DBGET
integrated database retrieval system
