Pectobacterium atrosepticum 21A: GZ59_35510
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Entry
GZ59_35510 CDS
T03293
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pato
Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pato03021
]
GZ59_35510 (rpoS)
Transcription machinery [BR:
pato03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GZ59_35510 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AIK15295
LinkDB
All DBs
Position
complement(3865208..3866200)
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AA seq
330 aa
AA seq
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MSQSTLKVNELHEDTDFEENGLDVFDDKALAEEDTNDNDSAEDELLSQGVPQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVPSRRRMIESNLRLVVKIARRYNNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVNRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDNDMKQNIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQVQGLSIEELFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagtacgctgaaagttaacgagttacatgaagataccgatttcgaagaaaat
ggacttgacgtttttgacgataaagcgctggcagaggaagataccaatgataatgactcg
gcggaagacgagctattatcgcaaggggtcccacagcgtgtcctggacgcaacacagctc
tatttgggagagattggctattcgccgcttttaaccgcagaagaagaagtttattttgcc
cgacgcgcgttgcgtggcgatgtcccatcgcgccgacggatgatcgagagtaacctgcgg
ctggtggtgaaaattgcccgccgttacaacaatcgtggtctggcgctgctggacctgatt
gaagaaggtaaccttggtctgatccgtgcggttgaaaaattcgatccagaaagaggattc
cgtttttcaacctacgctacctggtggattcgacagacgatagagcgggcgatcatgaat
caaacccgcaccatccgtttacctattcacattgtcaaagaactcaacgtttacctgcgc
accgcgcgcgagttgtctcataaactggaccacgagccgagtgcggaagaaattgccgaa
cagcttgataaacctgttgatgacgtcaaccgcatgctgcgcttgaatgaacgtattact
tccgtcgataccccgctgggtggtgattcggagaaagcgctgctggatattctggcagac
gaaaaagacaacggacctgaagacaccacgcaggataacgatatgaaacagaatatcgtt
aaatggttgtttgagcttaacgccaagcagcgtgaagtgttggcgcgtcgtttcggcctg
ttagggtatgaggcggctacgctggaagatgtgggtcgtgaaatcggcttaacgcgtgaa
cgtgttcgtcagattcaggttgaaggcttacgccgcctgcgggaaattttgcaggttcag
ggtttgagcattgaagaactgtttcgtgaataa
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