Pectobacterium atrosepticum 21A: GZ59_35940
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Entry
GZ59_35940 CDS
T03293
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pato
Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pato03009
]
GZ59_35940 (rumA)
Enzymes [BR:
pato01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GZ59_35940 (rumA)
Ribosome biogenesis [BR:
pato03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GZ59_35940 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
MTS
Methyltransf_11
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_4
FtsJ
Ubie_methyltran
Methyltransf_23
Methyltransf_15
Methyltransf_32
PDGF
CMAS
DUF4853
Motif
Other DBs
NCBI-ProteinID:
AIK15336
LinkDB
All DBs
Position
complement(3914394..3915746)
Genome browser
AA seq
450 aa
AA seq
DB search
MAQFYSPNRRVTTRKAVPAKNLTVTVASLDPFGQGVARHEGKTVFVTGVLPGEQAEVQLT
EEKRQFSHAKLKRLLTPSPQRVEPPCPHFTRCGGCQQQHADITLQQSSKTAALMRMMTRE
TGIELSAASLIAGTPYAYRRRARLALYFQAKEQRLLMGYRQSNSHDLVDIKACPVLRPEL
EALLQPLRDCLSQLSAVKRLGHVELVQAENGPLLVLRHLDPLHPADEQALRDFAQRQGVS
VYLAPDAESLTCLHGEEPVYHVAGLTLAFSPRDFIQVNDAVNQQMVAQALAWLDVQPQDR
ILDLFCGMGNFTLPLAQRAASVVGVEGVTALVEKGRENARRNALSNVTFFHQNLEDDVTQ
QPWAAQGFDKILLDPARAGAAGVMEQITRLAPKRVVYVSCNATTLARDSKVLLAAGYRLA
NVAMLDMFPHTGHLESMALFLHDTGTRKAQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctccaaaccggcgtgtgacgacccggaaagcggttccagcgaaa
aacctcactgtcacggtcgcatcacttgacccgtttgggcaaggtgtagcgcgtcacgaa
ggaaagacggtttttgtcacgggtgtgctgccgggagagcaggccgaggtgcaactgacg
gaagagaagcgtcagttttcacatgcaaagcttaaacgcctgttgacgccaagcccgcag
cgcgttgagccgccgtgccctcattttacccgctgtggcggctgtcagcagcagcatgca
gacattacgctgcaacagagcagcaaaacggcggcgttgatgcgcatgatgacgcgggaa
acgggtattgagctgtcagccgcatcgcttattgctggcacaccttatgcctatcggagg
cgcgcgcggcttgcgttatactttcaggcaaaagagcagcggctgttgatgggttatcga
cagtcaaattctcacgatctggtggatatcaaagcttgtccggtgttacgccccgagctt
gaagcgctgctgcaaccactgcgcgactgtttaagccagttaagcgcggtgaaacgcctt
gggcatgtggaactggtgcaggcggagaacggtccgctgctggtgctgcggcaccttgat
ccactgcacccagcggacgagcaggcattgcgtgattttgcccagcggcagggtgtctcg
gtttatctggcaccggatgctgaatcgctgacgtgtttgcatggtgaagagccggtttat
cacgtcgccgggctgacgctggcatttagcccgcgtgattttattcaggtcaatgatgcg
gtgaaccaacagatggttgcgcaggcactggcgtggctggatgtgcaaccacaggataga
atattggatctgttctgcggcatgggcaacttcacgctgccgctggcacagcgtgccgcc
agcgttgttggtgtggaaggggttaccgcgttagttgagaaagggcgtgagaatgcccga
cgcaatgcactgtccaatgtcacattttttcaccaaaatcttgaagatgacgtcacacag
cagccgtgggcagcccaaggttttgataagatattacttgatccggcacgtgcgggcgcg
gcaggcgtgatggagcagattaccagactggcaccgaaacgagtggtgtatgtttcctgt
aacgccacgacgctagcgcgcgacagcaaagtattactcgcagccggttatcggctggcg
aatgtcgcgatgttggatatgtttccacataccggacaccttgagtcgatggcactgttt
ttgcacgataccggcacgcggaaggcgcaataa
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