Pectobacterium atrosepticum 21A: GZ59_36810
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Entry
GZ59_36810 CDS
T03293
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00300
Lysine biosynthesis
pato00470
D-Amino acid metabolism
pato01100
Metabolic pathways
pato01110
Biosynthesis of secondary metabolites
pato01120
Microbial metabolism in diverse environments
pato01230
Biosynthesis of amino acids
Module
pato_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GZ59_36810 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GZ59_36810 (lysA)
Enzymes [BR:
pato01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GZ59_36810 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AIK15421
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Position
complement(4008205..4009467)
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AA seq
420 aa
AA seq
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MPHDLNDVTHALNAQSLRELPVRFGCPVWAYDAQTIVNRITQLRQFDTIRFAQKACSNTH
ILRLMHEQGVKVDSVSLGEIERALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVN
AGSVDMLEQLGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQR
YQLKLVGIHMHIGSGVDYGHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAID
TEHYYGLWNAAREKIAAHLGHPITLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDA
GFNDLMRPAMYGSYHHVSLLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFS
LPDAQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQTLEELLALEAL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgatctgaatgacgtaacacacgctctcaacgcgcaaagtttgcgtgaactg
cctgtccgttttggctgcccggtgtgggcctatgacgcccagactatcgttaatcgcatc
acccaactgcgccaattcgatacgattcgcttcgcacagaaggcgtgttccaacacgcac
attttgcgcctgatgcatgagcaaggtgtgaaagtcgattcggtatcgctgggggaaatt
gaacgggctctgatcgcaggatttgtgccgggcaccgatgctcacgagatcgtctttact
gccgatctgctggatcgcccgacgctgcaacgtgtttccgaattgaacattccggtgaac
gccggttcggtcgatatgctggaacagcttgggcagcagtcgccggggcatccggtgtgg
ctgcgcgtgaatccgggttttggtcatggtcatagccagaaaactaacaccggtggcgag
aacagtaagcacggtatttggtacggcgatttgccgctggcgttggcgcacattcagcgc
tatcagctgaagctggtgggaattcacatgcatattggctctggcgtcgattacggccat
ctggagcaggtgtgcgaggcgatggtgcagcaggtcgttgagctgggtcaggatatcgag
gcgatttcagcgggcggcgggctgtcgattccgtatcgtcacggtgaagaagcgattgat
actgaacactattacgggctgtggaacgcggcgcgtgagaaaattgctgcgcatctcggt
catcccattacgctggaaattgagccagggcgtttcctggtcgctgaatctggcgtgctg
gtagcggaagttcgagcgataaaatccatgggcagccgccactttgtactggttgatgct
gggtttaacgatttgatgcgtccggcgatgtacggcagctatcaccatgtttctctgttg
tcgggcgatggccgcgatatcagccagtccacgttgcgcgacagtgtgattgcggggccg
ctgtgtgaatccggcgatgtgtttacccagcaggcgggcggtggcgtggaaactttctcg
ttgccggatgcgcaagttggcgactatctggtcttccatgacaccggtgcgtacggtgca
tctatgtcctctaactacaacagccgtccgttgctgccagaggtactgtttgaaaatggc
gaaccgcgcttgatccgccgtcgccaaacgctggaagagctgctggcgctggaagcgctt
taa
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