Pectobacterium atrosepticum 21A: GZ59_37820
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Entry
GZ59_37820 CDS
T03293
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00010
Glycolysis / Gluconeogenesis
pato00020
Citrate cycle (TCA cycle)
pato00260
Glycine, serine and threonine metabolism
pato00280
Valine, leucine and isoleucine degradation
pato00310
Lysine degradation
pato00380
Tryptophan metabolism
pato00620
Pyruvate metabolism
pato00630
Glyoxylate and dicarboxylate metabolism
pato00640
Propanoate metabolism
pato00670
One carbon pool by folate
pato00785
Lipoic acid metabolism
pato01100
Metabolic pathways
pato01110
Biosynthesis of secondary metabolites
pato01120
Microbial metabolism in diverse environments
pato01200
Carbon metabolism
pato01210
2-Oxocarboxylic acid metabolism
pato01240
Biosynthesis of cofactors
Module
pato_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pato_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pato_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pato_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
GZ59_37820 (lpdA)
00020 Citrate cycle (TCA cycle)
GZ59_37820 (lpdA)
00620 Pyruvate metabolism
GZ59_37820 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
GZ59_37820 (lpdA)
00640 Propanoate metabolism
GZ59_37820 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GZ59_37820 (lpdA)
00280 Valine, leucine and isoleucine degradation
GZ59_37820 (lpdA)
00310 Lysine degradation
GZ59_37820 (lpdA)
00380 Tryptophan metabolism
GZ59_37820 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GZ59_37820 (lpdA)
00670 One carbon pool by folate
GZ59_37820 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pato04147
]
GZ59_37820 (lpdA)
Enzymes [BR:
pato01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
GZ59_37820 (lpdA)
Exosome [BR:
pato04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
GZ59_37820 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
FAD_binding_2
HI0933_like
Thi4
NAD_binding_8
FAD_binding_3
AlaDh_PNT_C
DAO
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AIK15503
LinkDB
All DBs
Position
complement(4101557..4102981)
Genome browser
AA seq
474 aa
AA seq
DB search
MSTEIKAQVVVLGAGPAGYSAAFRAADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKIRLWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLEVDGENGKTTINFDNAIIAAGSRPIQLPFIPHDDPRVWDSTDALELKSVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIHVDKQ
MRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETAIFPWAASGRAIASDCAEGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIFEGSITDLPNPKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaattaaagctcaggtagtggtacttggtgccggccccgcgggttactct
gctgcattccgcgcggcggatttgggtctggaaaccgtactggtagagcgctactccacg
ctgggtggggtgtgtctgaatgtgggttgtattccttccaaagccctgctgcacgtcgct
aaagtcattgaagaagccaaagcactggcggaacacggtatcgtgttcggtgaacctaaa
accgacattgataaaatccgtctgtggaaagaaaaagtcatcaaccaactgaccggtggt
ctggctggtatggcgaaaggccgtaaagttaaggtcgttaacggtctgggcaaatttacg
ggtgccaacacgctggaagttgacggtgaaaacggcaaaacgacaatcaacttcgataac
gcgattatcgctgcgggttcacgtccgatccaactgcctttcattcctcatgatgacccg
cgtgtatgggattctaccgatgcgctggagctgaaaagcgtcccagaacgtctgttggtt
atgggcggcggtatcatcggtctggaaatgggtacggtttaccatgctctgggttcacag
atcgacgtcgttgaaatgttcgatcaagtgattccggccgctgacaaagatgtcgttaag
gtcttcaccaagcgtatcagcaagcagttcaatctgatgctggaaaccaaagtgacggca
gtagaagccaaagaagacggcatctatgtgacgatggaaggcaaaaaagcgccagccgag
ccacagcgttacgatgcagttctggttgctatcggtcgtgtaccgaacggtaaaaatctg
gatgcaggtaaagcgggcgtggaagttgacgatcgcggcttcatccatgttgataaacaa
atgcgcaccaacgtgccgcacatctacgctatcggcgacatcgtcggtcagccgatgctg
gcgcacaaaggcgtgcatgaaggccatgttgctgccgaagtgatctccggtaagaaacac
tacttcgatccgaaagtgattccttctatcgcctataccgaaccggaagtcgcgtgggtg
ggtctgactgagaaagaagccaaagagaaaggcatcagctacgaaaccgcgatcttccca
tgggcggcgtctggccgtgctatcgcgtctgattgcgctgaaggtatgaccaaactgatt
ttcgacaaagaaacacatcgtgttatcggtggtgcgattgtcggtactaacggtggtgaa
ctgttaggcgaaatcggtctggcgatcgaaatgggttgtgatgcggaagatatcgcgctg
accatccatgcgcacccgacgctgcatgagtctgttggtctggctgctgaaatctttgaa
ggcagcatcactgacctgccgaacccgaaagcgaagaagaagtaa
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