Pectobacterium atrosepticum 21A: GZ59_38090
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Entry
GZ59_38090 CDS
T03293
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00470
D-Amino acid metabolism
pato00550
Peptidoglycan biosynthesis
pato01100
Metabolic pathways
pato01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GZ59_38090 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GZ59_38090 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GZ59_38090 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pato01011
]
GZ59_38090 (ddlB)
Enzymes [BR:
pato01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GZ59_38090 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pato01011
]
Precursor biosynthesis
Amino acid ligase
GZ59_38090 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
TTL
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
RimK
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
AIK15529
LinkDB
All DBs
Position
complement(4132359..4133279)
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AA seq
306 aa
AA seq
DB search
MTEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGINAHAVDTRDFPVTTLKEEGFTNVFI
ALHGRGGEDGTLQGVLEFLGLPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRR
QYLDTEANTLLAQFTHLGLPLIVKPSREGSSVGMSKVNTLSDLPAALEEAFRHDDDVLVE
KWLSGPEYTVAILGDEVLPSIRIQPAGTFYDYEAKYLSDDTQYFCPSGLSDEQEQALAAL
AMAAYRAVDCSGWGRVDFMLDSDDAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVK
ILELAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaagttgctgtattgcttggtggaacctctgccgaacgtgaagtgtcgtta
ctttccggtcaggcggttttggctggcctgaaagaagcgggcatcaatgcgcatgcggtt
gatacgcgtgacttccctgtgacgacgttgaaagaagaaggttttaccaacgtttttatc
gccttgcatggtcgtggtggtgaagatggcacattgcagggtgttctggaatttctgggg
ttgccttataccggtagcggcgtcatggcatctgcactgacgatggataagctccgaacc
aaacaggtgtggcaagcggtggggttgccggtgtcgccttatgtggcgctggatcgtcgc
caatatttagatacggaagcgaatacgttattggcgcagttcacccatctcgggttgccg
ctgatcgtcaagccaagccgtgaaggttccagtgtgggtatgagcaaagtgaatacgctt
agcgacctgcctgccgcactggaagaagcattccgccacgatgacgatgttctggtcgaa
aaatggctgagcggtccagagtatacggttgctatcctaggtgatgaggtattgccttct
attcgtattcaacccgcgggtacgttttacgattatgaagcgaagtatttatcggatgat
acgcagtatttctgtccgagtggtttgtcagacgagcaagagcaagcgttagctgcattg
gcgatggcggcttatcgtgcggtagattgcagcggatggggacgtgtcgattttatgctg
gatagcgacgacgctttctacctgcttgaagtgaatacctctccggggatgacgagccac
agtctggttcctatggcggcgcgtcaacgtggcctgactttctcgcaattggtcgtgaaa
attctggagcttgctggctga
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