Pectobacterium atrosepticum 21A: GZ59_38250
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Entry
GZ59_38250 CDS
T03293
Name
(GenBank) putative AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00061
Fatty acid biosynthesis
pato00071
Fatty acid degradation
pato01100
Metabolic pathways
pato01212
Fatty acid metabolism
pato02024
Quorum sensing
pato04146
Peroxisome
Module
pato_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GZ59_38250
00071 Fatty acid degradation
GZ59_38250
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GZ59_38250
09145 Cellular community - prokaryotes
02024 Quorum sensing
GZ59_38250
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pato01004
]
GZ59_38250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pato04147
]
GZ59_38250
Enzymes [BR:
pato01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GZ59_38250
Lipid biosynthesis proteins [BR:
pato01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GZ59_38250
Exosome [BR:
pato04147
]
Exosomal proteins
Exosomal proteins of breast milk
GZ59_38250
Exosomal proteins of breast cancer cells
GZ59_38250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AIK15545
LinkDB
All DBs
Position
complement(4151136..4153025)
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AA seq
629 aa
AA seq
DB search
MTVDCTPNNVQLYAETLSNSFPLEILLQMNNHLQPYHVVHRVQDQINHCAGRITLREWTP
AGEQQLTWTQAGQRIQRIASGLLALGLDVQERVAIFSHNSMNWSLADLALLHLRAISVPI
YATNTTAQAAFIINDADIRTIFVGGQEQLDALLALRDTCPQLRNIIVMDKDVNLRGSDIV
QSLHEFEAQAVDDFWRDEWQTRIDSRDLNDLFTLIYTSGTTGEPKGVMLDYTNMAMQLKL
HDDRLSMSANDVSLCFLPLSHVFERAWSFVVMHCGAQNVYLSDTNLVRGAMLAVKPTVMC
AVPRFYEKVYSAIHEKVAQAPWYRQRLFNWAIAQGQHAFLASNTTKKGGLFRRVMHHYAD
RLVLGKLRQLLGGEIRFMPAAGARLDDNIILFFRSIGIRIIYGYGMTETCATVSCWEEGR
FRLGSIGTPLPGIEVRIGEEKEIQVRGATIMRGYFHRPQETAETFTEDGWLKTGDAGELD
ANGNLFITERLKDLMKTSGGKYIAPQHLEGTLGQDRFIEQVAIIADTRKYVSALIVPCFD
ALEEYAHSINLKYHDRLELLRHSHIIELFEQRLREMQKELSRVEQVKKFTLLPVPFSMAE
GELTPTLKLRRKIINQRYQLEIDAMYVES
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacggtagactgcacgccaaataatgtacagctgtacgctgaaacgctgtcaaattca
ttccccttagaaattcttttacagatgaataatcatttacagccataccatgtggttcac
cgggttcaagatcagatcaatcactgcgcaggtcgtattaccttgcgcgagtggacgcct
gcgggcgaacagcagctcacctggacacaggctgggcagcgcattcaacgcattgccagt
gggctattggcgctggggctggatgttcaggaacgggttgcgattttctcgcataactca
atgaattggtcgctggctgacctggcactgctgcacctgcgggcgatcagcgtgccaatc
tatgccacgaatacgacagcgcaggcggcattcataatcaatgatgccgatatccgtacg
atattcgtcggcggtcaggaacagttggatgcactgctagcgctacgcgatacctgtcca
cagttgcgaaatatcattgtgatggataaagacgtcaatctgcgtggtagcgatattgtg
caatcgctgcatgagtttgaagcgcaggccgtagacgatttttggcgtgatgaatggcag
acgcgcatcgacagccgcgatctcaacgatctgtttacgctgatttatacctctggcacc
accggtgagccgaaaggcgtcatgctggattacaccaacatggcgatgcagcttaagcta
cacgacgatcgcttaagcatgtcggcaaatgatgtctcactctgcttcttaccgctttcc
catgtgttcgagcgtgcctggagtttcgttgttatgcactgtggcgcacagaacgtgtac
ctcagcgatacgaatttagtgcgtggtgcgatgcttgcggtgaaacctactgtgatgtgc
gccgtaccgcgtttttatgagaaagtttacagcgcaatccatgaaaaagtggcacaggct
ccctggtatcgccagcggttgttcaactgggctattgcgcaggggcaacacgcttttctg
gctagcaatacgacgaaaaagggcggactttttcgccgcgtcatgcatcactatgctgac
cggctggtgttagggaaactgcgtcagcttctggggggggagattcgttttatgcccgca
gcgggcgcacggctggatgacaacattattctgtttttccggtcgatcgggattcgcatc
atttatggttacggcatgaccgaaacctgcgcgacggtttcctgctgggaagaaggccga
ttccgcttgggctctatcggtacgccgctaccgggtattgaggtacgcattggtgaggaa
aaagagatccaggtgcgtggcgcgaccatcatgcggggttatttccatcgtccgcaggaa
accgcagaaacctttaccgaagacggctggctgaaaaccggcgatgcgggagagctggat
gccaacggtaacctgtttattaccgaacggttgaaagatctgatgaaaacctcaggcggt
aaatatatcgcaccgcagcatctggaaggcacgcttggacaggatcgttttatcgaacag
gttgcgattattgcagacacgcgtaagtacgtgtctgcactgatcgttccgtgtttcgac
gcgttggaagaatacgctcactccatcaacttgaagtaccacgatcgtctggagttgctg
cgccacagccatattattgaactgttcgagcagcgcctgcgggagatgcagaaagagctt
tcccgcgttgagcaggtgaagaaattcacgttgttgccagtgccgttttcgatggcggaa
ggggagctgacgccaacgctcaagctacgtaggaagatcatcaaccagcgttatcagttg
gaaattgatgcgatgtacgtagagtcttga
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