Pectobacterium atrosepticum 21A: GZ59_38680
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Entry
GZ59_38680 CDS
T03293
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00220
Arginine biosynthesis
pato00240
Pyrimidine metabolism
pato00250
Alanine, aspartate and glutamate metabolism
pato01100
Metabolic pathways
pato01110
Biosynthesis of secondary metabolites
pato01240
Biosynthesis of cofactors
Module
pato_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GZ59_38680 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GZ59_38680 (carB)
00220 Arginine biosynthesis
GZ59_38680 (carB)
Enzymes [BR:
pato01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
GZ59_38680 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
AIK15585
LinkDB
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Position
complement(4197159..4200383)
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERKGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAADLGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPAIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVDLDDPEA
LTKIRRELKDAGAERIWYIADAFRAGMSVDGVFNLTNVDRWFLVQIEELVRLEEQVAEKG
ITALDADFLRALKRKGFADARLAKLAGVAESEIRKLRDKFDLHPVYKRVDTCAAEFSTDT
AYMYSTYEEECEANPTQDRDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTFEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVP
VIGTSPDAIDRAEDRERFQHAVNRLGLKQPSNATVATIEQAVEKARGIGYPLVVRPSYVL
GGRAMEIVYDEIDLKRYFQNAVSVSNDAPVLLDRFLDDAIEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVEKLAFELCVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEIIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSSSHMKKTGRALLSVREGDKARVVDL
AAKLLKHGFELDATHGTAIELGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMSLTADPTEKVTSVQEMHAMIKG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatattaaaagcatcctgattctaggcgccggcccgattgtcatc
ggtcaggcgtgtgagtttgactactcgggggcacaggcgtgtaaagcgctgcgtgaagag
ggttaccgcgttattctggtgaactccaacccggcaaccatcatgaccgaccctgaaatg
gccgatgcgacctacatcgagccgattcactgggaagtggtgcgtaaaattattgaaaaa
gagcgtccagatgctgtgctgccgacgatgggcggccagacggcgctgaactgtgcgctg
gagttggaacgtaagggcgtgctggcggaattcggcgtcaccatgattggtgcaacggcg
gatgcgattgataaagcagaagatcgtcgtcgtttcgatgtggcgatgaagaaaatcggt
ctggataccgcacgttccggtattgcacacaatatggaagaagcgctggctgtagcggct
gacctcggcttcccgtgcattatccgtccttcctttacaatgggcggcaccggtggcggt
atcgcttacaatcgtgaagagtttgaagagatctgtgagcgcggactggatctttctcca
accaaagagctgctgatcgatgaatcgctgatcggttggaaagagtacgagatggaggtg
gtgcgtgataagaacgataactgcatcatcgtctgctcaatcgaaaacttcgatgccatg
gggatccacaccggagactccatcaccgttgcgccagcgcaaacgctgacggataaagaa
tatcaaatcatgcgtaacgcctcgatggcggtactgcgtgaaatcggtgtagaaaccggt
ggttctaacgttcagttctcggtgaacccgaaaacaggtcgcctgattgttatcgaaatg
aacccgcgtgtatcacgttcttccgcgctggcgtctaaagcaacgggcttcccgattgcg
aaaatcgcggccaaactggcggtgggttatacgctcgatgagttgatgaacgacatcact
ggtggtcgtacgccagcgtctttcgaaccggctatcgactatgttgtcaccaagatccca
cgtttcaacttcgaaaaattcgccggtgccaatgaccgcctgaccacgcagatgaaatct
gtgggtgaagtgatggcgattggtcgcacacagcaagaatccttgcagaaagcactacgt
ggtctggaagtcggtgcgactggcttcgatccaaaggtagatctggacgaccctgaagcg
ctgactaaaattcgccgcgagctgaaagatgccggtgccgagcgtatctggtacatcgct
gatgctttccgcgcgggtatgtcagtcgatggcgtatttaacctgaccaacgttgatcgc
tggttcctggtgcaaattgaagagctggtgcgtctggaagagcaggttgcagaaaaaggt
atcaccgcgctggatgcggatttcttacgtgcactgaagcgtaaaggctttgctgatgcg
cgtctggcgaaactggctggcgtggcggaaagcgaaattcgcaagctgcgcgataaattc
gacctgcatccggtgtataagcgtgtcgatacctgtgcggcagaattctcgaccgatacc
gcttatatgtattccacgtacgaagaagaatgtgaggctaacccgactcaggatcgtgac
aaaatcatgatattgggtggtgggccaaatcgtattggtcaggggatcgagtttgactac
tgttgcgtccatgcttcgctggcgctgcgtgaagatggctatgaaaccatcatggttaac
tgtaaccctgaaaccgtttcaacagactacgatacgtccgaccgcttgtacttcgaaccg
gtaacgtttgaagatgtactggaaatcgtccgtattgagaagccaaagggcgttatcgtg
cagtacggtggccagacgccgctgaaactggctcgcgagctagaagccgctggagtaccg
gttatcggaactagcccagacgcgattgaccgtgcagaagaccgtgagcgcttccagcat
gccgtcaatcgtcttgggctgaagcaaccgtctaacgccacggtagcgacgattgagcag
gcggtagagaaagcgcgtggcatcggctatccgctggtcgtccgtccttcttatgttctg
ggcggtcgcgcgatggaaatcgtgtatgacgaaatcgaccttaagcgttatttccaaaac
gcggttagcgtatccaacgatgcgcccgttctgctggaccgtttccttgacgatgctatt
gaagttgacgtcgatgcgatttgcgacggtgaacgtgtactgattggcggcattatggaa
cacatcgagcaggcgggggttcactccggtgactcggcttgttcactgcctgcttacaca
ctgagcaaagagattcaggatgtgatgcgtcagcaggttgaaaaactggcgtttgaactt
tgcgttcgcggcctgatgaacgtgcagtttgcggtgaaggataacgaagtttatctgatt
gaggtgaacccgcgtgccgcgcgtactgtcccatttgtctcgaaagcgaccggtgttcca
ttggcgaaagtcgctgcgcgagtgatggcaggcaaaacgctggctgagcagggtgtcacc
aaagaaatcatcccgccgtattactcggtgaaagaagtggtgctgccgttcaacaaattc
cctggcgttgacccgattctggggccagagatgcgttcgaccggtgaagtcatgggcgtt
ggccgcacgtttgctgaagcgtttgccaaagcgatgctgggcagcagttcgcacatgaag
aaaactggacgtgcgctgctgtcggtacgtgaaggcgataaagcccgcgtggtggatctg
gcggctaagctgttgaagcacggttttgagctggatgcgacgcacggcacggcgattgaa
ctgggtgaggctggcattaatccgcgtctggtgaataaggtgcatgaaggtcgtccgcac
attcaggaccgcatcaagaacggcgagtacacctacatcgtcaacaccaccgcagggcgt
caggcgattgaagattccaagctgattcgccgcagcgcgctgcaatacaaggtgcactac
gacaccacgctgaatggtggttttgctacggcaatgtcgttgacggcagatccgacggag
aaggtcacttccgtgcaggaaatgcatgcgatgattaaaggctga
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