Pectobacterium atrosepticum 21A: GZ59_41250
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Entry
GZ59_41250 CDS
T03293
Symbol
pelC
Name
(GenBank) pectate lyase III
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00040
Pentose and glucuronate interconversions
pato01100
Metabolic pathways
pato02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GZ59_41250 (pelC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GZ59_41250 (pelC)
Enzymes [BR:
pato01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GZ59_41250 (pelC)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AIK15829
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Position
4441667..4442791
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AA seq
374 aa
AA seq
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MKYLLPSTAAGLLLLAAQPTMAANTGGYATTDGGNVAGAVNKTARSMQDIIDIIEEAKLD
SKGKKVKGGAYPLIITYNGNEDALIKAAENNICGQWSKDARGVEIKEFTKGVTIIGTNGS
SANFGIWLTKSSDVIIRNMRFGYMPGGAQDGDAIRIDNTPNVWIDHNEIFAKNFECQGTK
DGDTTFESAIDIKKASTNVTVSYNYIHGIKKVGLSGFSSSDTGRDLTYHHNIYDDVNARL
PLQRGGQVHAYNNLYTGITSSGLNVRQKGIALIERNWFENAKNPVTSRYDGSNFGTWELR
NNNIMSPADFAKYNITWDKDTKAYVNAEDWKSTGTFASVPYSYSPVSPQCVKDKLANYAG
VNKNLAVLTAANCN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctacagccgctgggctgttattacttgcagcccaaccgacg
atggcggcaaatacggggggttacgctaccactgacggtggtaacgttgccggtgccgtg
aacaaaactgcgcgctctatgcaagatatcattgatattatcgaagaggcgaagctggat
tctaaaggtaagaaagtcaaaggtggggcttacccactcatcatcacctataacggtaat
gaagacgcgctgatcaaagctgctgaaaacaatatctgcggccagtggagtaaagacgct
cgcggtgtggaaatcaaagagtttaccaaaggggttaccatcatcggtaccaacggatct
tccgctaacttcgggatctggctgacaaaatcatctgatgtcatcatacgcaacatgcgc
tttggttacatgccgggtggcgcgcaggacggtgatgccattcgtatcgataacacgccg
aacgtttggattgaccacaacgagatcttcgctaaaaactttgaatgtcagggcacaaaa
gacggtgacaccaccttcgaatctgcgattgatatcaagaaagcttctaccaacgtgacg
gtgtcgtacaactacattcacggcatcaaaaaggtgggactgagcggcttcagcagcagc
gatacgggccgtgatctgacttaccatcacaatatttacgacgacgttaacgcccgtctc
ccactgcaacgcggcggtcaggttcacgcttacaacaacctgtataccggcatcaccagt
tctggcctgaacgtacgccagaaagggattgcgctgatcgaacgtaactggttcgagaat
gcgaaaaacccggtgacctcacgttacgacggttccaacttcggtacctgggaactgcgt
aataacaacatcatgagcccagccgacttcgctaaatacaatatcacttgggataaagac
accaaagcctacgtgaatgctgaagactggaaaagtaccggcacgttcgcttctgttcct
tacagctactctccagtttcaccacagtgcgtgaaagataaactggcgaactatgctggc
gtgaacaaaaacctggccgtgctgacggcagcaaattgcaactaa
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