Pectobacterium atrosepticum 21A: GZ59_42360
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Entry
GZ59_42360 CDS
T03293
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato03420
Nucleotide excision repair
pato03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GZ59_42360 (uvrD)
03430 Mismatch repair
GZ59_42360 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pato03400
]
GZ59_42360 (uvrD)
Enzymes [BR:
pato01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GZ59_42360 (uvrD)
DNA repair and recombination proteins [BR:
pato03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GZ59_42360 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GZ59_42360 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
Reg_prop
Motif
Other DBs
NCBI-ProteinID:
AIK15937
LinkDB
All DBs
Position
complement(4575756..4577918)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQRAAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRINHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIHMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFAGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTEGVEGEPISLYCAFNELDEARYVVNRIKAWQEKGGVLKDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIRDSLSYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRVLLQEKVLAGRAAASLQRFVELIDALAYETSELPLHVQ
TDRAIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMEKLTITYAESRRLYGKEAYHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITENDSGYKLGQRVRHAKFGEGTIVNLEGSGEHARLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgatggcctcaacgacaaacagcgtgccgcggtagccgcg
ccgcgcagcaatttattggtgctggcaggggcgggcagcggcaagactcgggtactggtt
catcgtattgcctggttattgtccgtcgaaaactgttcgccgtactccatcatggcggtg
acgtttaccaacaaagccgcggcagagatgcgtcatcgtatcaaccacttgatcggcacc
agtcagggtggcatgtggattggcaccttccacggattggcgcaccgtctgctgcgcgcg
caccatatggatgccaatctgccgcaggatttccagattctggacagcgacgatcagctg
cgcttgttgaagcggctgattcgggcgctgaatctggatgagaagcagtggcctccgcgt
caggcgatgtggttcatcaacggtaagaaagacgaaggtttacgtccgcagcacattgaa
agctacggcaaccctatcgagcaaacgtggcagcgtgtctatcaggcttatcaggaagcg
tgcgatcgcgccggactggtggatttcgccgaactgctgctgcgcgcacatgaactgtgg
ctgaacaaaccgcatgtgctgaaccactatcgtgagcgttttaccaatattctggtggac
gaatttcaggataccaaccgtattcaatacgcctggatccacatgctggcgggcgatagc
gccaaggtgatgatcgttggagatgacgatcagtcgatttacggctggcgtggggcgcag
gtcgaaaatattcagctgttcctgaaagatttcgccggagcagaaacaatccgtctggag
cagaactatcgttcgaccagcaatattctgaaagcggcgaatgccctgattgcccacaac
ggcgggcggctcggcaagaacctatggacggaaggtgtcgagggcgaacctatttcgctt
tactgcgcattcaacgaactggatgaggcacgttacgtcgttaaccgaattaaagcctgg
caggaaaagggtggtgtgctgaaagataacgccattctgtatcggagcaacgcccagtcg
cgcgtattggaagaggcgctgttgcagcagagtatgccataccgtatctacggcgggatg
cgcttcttcgaacgtcaggaaattagagattcgctatcttatctgcgtctcatctccaat
cgtaatgacgatgcggcgttcgagcgtgtggtgaatacgccgacgcgcggcattggcgat
cgcacgctggacgtggtgcgtcagacggcgcgcgatcgccaactgacgctgtggcaatcc
acgcgggtgctgttgcaagagaaagtgctggctgggcgtgcggcggcatcgctgcaacgc
tttgtcgaattgatcgatgcgctggcctatgaaacgtctgaactgccgctgcatgtgcaa
accgaccgagcgattaaagattctggcctgtggagtatgtacgaacaggaaaaaggcgag
aaagggcaggcacgagtagaaaacctggaggaactggtgacggctacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgcttcaggcattcctgtcacatgccgcgctg
gaagcgggtgaaggtcaggcggatgcaaatcaggacgcggtgcagcttatgacgctgcac
tctgcgaaagggctggaattcccgcaggtgtttatcgtcggtatggaagaaggcatgttc
cccagccagatgtcgctggatgaaggtgggcgtctggaagaagaacgtcgtctggcttat
gttggcgtcacgcgcgcaatggaaaagctgacgataacctacgccgaatcccgccgttta
tacggcaaggaagcctatcatcggccttcccgattcgtcggtgaactgcctgaagagtgt
gttgaagaggtgcggttacgtgccagcgtctcccgcccggtcaatcaccagcgccttggc
acgccgataacggaaaatgacagcggctacaagctgggacaacgggttcgccatgcgaaa
ttcggcgaaggcaccatcgtgaatctggaaggtagcggtgagcacgcccgtcttcaggtc
gcgtttcaggggcagggtatcaaatggctggttgccgcctacgccagattggaaacggtg
tga
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