Pectobacterium atrosepticum 21A: GZ59_42680
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Entry
GZ59_42680 CDS
T03293
Symbol
rffA
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00541
Biosynthesis of various nucleotide sugars
pato01100
Metabolic pathways
pato01250
Biosynthesis of nucleotide sugars
Module
pato_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GZ59_42680 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pato01007
]
GZ59_42680 (rffA)
Enzymes [BR:
pato01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
GZ59_42680 (rffA)
Amino acid related enzymes [BR:
pato01007
]
Aminotransferase (transaminase)
Others
GZ59_42680 (rffA)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
OKR_DC_1
Androglobin_V
Motif
Other DBs
NCBI-ProteinID:
AIK15963
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Position
complement(4604852..4605982)
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AA seq
376 aa
AA seq
DB search
MIPFNAPPVVGTELDYMQAAMSSGKLCGDGGFTRRCQQWLEHYSGSKKVLLTPSCTASLE
MAAILLDIKPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETKIEAAITEKT
RIIVPVHYAGVACEMDAIMALAKKYDLYVVEDAAQGVMSSYKGRVLGSIGHIGCFSFHET
KNYTSGGEGGATLINDARLVERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMADIQA
AYLWAQLEAARPINERRLKLWQNYYAAFKSLADAGRITLPTVPANGIHNAHMFYIKLRDQ
DDRSAFINYMKEAEIMTVFHYIPLHSCPAGLNFGRFSGDDRYTTQESERLVRLPLFYNLS
DVNQRTVINTILSFFS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattccatttaatgcgccaccggttgtcggtacggaactggattatatgcaggctgcc
atgagcagcggcaaattgtgcggcgatggcggatttactcgccgctgtcagcagtggctg
gaacattactccggtagcaagaaagtcctgcttacgccttcctgcacagcgtcgctggag
atggccgctatcctactggatattaagcccggcgatgaagtgatcatgccgagctatacc
ttcgtctctaccgccaacgcctttgtgctgcgcggtgcgaagatcgtgtttgtcgatatc
cgcccagatacgatgaatattgacgagacgaaaatcgaagcggcaattacggaaaaaaca
cgcattatcgtgccggttcactacgcgggcgtcgcctgcgagatggacgcgattatggca
ctggcgaaaaaatacgatttatatgtcgtggaagatgcggcacagggcgtgatgtccagc
tacaaaggccgcgttctggggtctattggtcacatcggctgcttcagttttcacgaaacc
aaaaactacacctcgggcggtgagggcggggccacgttgattaatgacgcgaggctggtg
gaacgagcggaaatcatccgtgaaaaaggcaccaaccgtagccagttcttccgtggacag
gtggacaaatacacctggcgtgacatcggctcaagctatctgatggcggatattcaagct
gcttatctctgggcacagctggaagccgcgcgacccatcaacgagcgtcgcctgaaactg
tggcagaactactatgcggcattcaaatcgctggccgatgcggggcgtataacactgccg
accgtgcctgccaatgggatccacaacgcgcacatgttttatatcaaactgcgcgatcag
gacgaccgcagtgcgtttatcaattacatgaaagaagccgaaatcatgacagtctttcat
tatatcccgctacatagctgcccggcgggtctgaacttcggtcgtttctccggtgacgat
cgctacaccacgcaggaaagcgaacggctggtacgtttaccgctgttctacaacctgtcg
gacgtcaatcagcgcaccgtcattaataccattctgagcttcttctcctga
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