Pectobacterium atrosepticum 21A: GZ59_44400
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Entry
GZ59_44400 CDS
T03293
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
pato
Pectobacterium atrosepticum 21A
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pato03021
]
GZ59_44400 (rpoH)
Transcription machinery [BR:
pato03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GZ59_44400 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AIK16127
LinkDB
All DBs
Position
complement(4791656..4792513)
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AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLEAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKAKTRLGWFNQDEVELVARELGVTTKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFADGIEEDNWDTHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacga
ctgcattatcagggcgatctggaggctgctaagcacctgattctttcacacctgcgtttt
gttattcacgttgcccgtaactattccggctacggcctgccgcaggcggacctgattcag
gaagggaacatcggcctgatgaaagcggtacgtcgcttcaaccctgaagttggcgtgcgt
ctggtttctttcgccgtgcattggatcaaggcagaaattcatgaatacgtgctgcgtaac
tggcgtatcgtgaaggtagccaccactaaagcacagcgtaagttgttctttaacctgcgg
aaggcgaaaacacgcctcggctggtttaaccaggatgaagtcgaactggtagcgcgtgaa
cttggtgtgaccaccaaagacgtgcgcgagatggaatcccgcatggcggcgcaggacatg
accttcgatccgacgccggaagaggactcgcacgacggcaaagcgatgtcgccaatgctt
tacctacaggataaatcgtctgactttgccgatggcattgaagaggacaactgggatacg
catgcggccgataagctcacctacgcgctggaagggctggatgaacgtagccagcacatt
attcgcgcccgctggctggatgatgacaacaaatccaccttgcaggaactggccgaccaa
tacggtgtttccgcagagcgtgtacgtcagttagaaaagaatgcgatgaaaaaactgcga
gcggcgatagaagcgtaa
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