Pectobacterium atrosepticum JG10-08: EV46_00040
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Entry
EV46_00040 CDS
T03199
Name
(GenBank) transcriptional regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr02020
Two-component system
patr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EV46_00040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EV46_00040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
patr02022
]
EV46_00040
Two-component system [BR:
patr02022
]
OmpR family
QseC-QseB (quorum sensing)
EV46_00040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
IOR_mid
Motif
Other DBs
NCBI-ProteinID:
AIA69029
LinkDB
All DBs
Position
complement(9014..9676)
Genome browser
AA seq
220 aa
AA seq
DB search
MRVLLIEDDRLIGDGLKAGLNKLGFNIDWFTEGKAGATALKAAPYDAVVLDLSLPGMDGM
DILRQWRQAGHDEPVLILTARDALEQRVEGLQQGADDYLCKPFALTEVAARLQALIRRRH
GQLQPVLTHGAVSLEPGSRSVTLNSEPLILKSRELALLELFLLNPNRVLTRAQLEEKLYS
WDDDVSSNAVEVHIHHLRKKLGSGFIRTVHGVGYILGDAP
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagagtattgttaatcgaagacgatcgcctgatcggtgatggcctaaaagctgggctt
aacaaactgggctttaatattgattggtttacggaaggtaaagcgggcgctaccgcattg
aaggccgccccttatgatgcagtggtgctcgatctcagcctgccgggcatggacggcatg
gatatcctgcgccagtggcgtcaggctggacatgacgagccggtactgattctgaccgcc
cgcgatgcgctggaacagcgcgtagaaggattgcagcaaggagcggatgattatttatgt
aagccctttgcgctgacagaagttgccgctcgcctgcaggcgctgattcgtcgccgtcac
ggccaactccaacccgtattaacacatggcgctgtttcccttgagcctggctcacggagc
gtcacgcttaacagtgagccgttgatactaaaatcccgcgagctggcgctgttggaactg
ttcttgctcaatccgaaccgcgtactcacgcgcgcgcagttggaagagaagctctacagc
tgggatgatgatgtctccagcaatgcggtagaagtccatatccaccacctgcgcaaaaag
ctgggcagcgggtttattcgtaccgtgcatggcgttggctatattctgggagatgcacca
tga
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