Pectobacterium atrosepticum JG10-08: EV46_00865
Help
Entry
EV46_00865 CDS
T03199
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00541
Biosynthesis of various nucleotide sugars
patr01100
Metabolic pathways
patr01250
Biosynthesis of nucleotide sugars
Module
patr_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EV46_00865 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
patr01005
]
EV46_00865 (rfaD)
Enzymes [BR:
patr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
EV46_00865 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
patr01005
]
Core region
EV46_00865 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AIA69187
LinkDB
All DBs
Position
complement(191377..192309)
Genome browser
AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKSLNDIGYRDILVVDNLKDGTKFVNLVDLDIADYVDKEDFVASI
VAGDDLGDIEAVFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLDRSIPFLYASSAATY
GGRNDNFIEDRQYEQPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGENPKLFSGSENFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADATLAFHNKGGVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVA
EYMTWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggcggtgccggttttatcggcagcaatatcgtaaaatctctgaat
gacatcggctaccgggacattctggttgtcgataacctgaaagacggcaccaagttcgtc
aatctggtcgatctggacatagcagattacgtggataaggaagatttcgtcgccagcatc
gttgcgggtgacgatctgggcgatatcgaggccgtattccatgaaggtgcctgctcctcc
accaccgagtgggatggcaaatacatgatggataacaactatcagtattccaaagatgtg
ctgcactactgcctcgatcgcagtattccgttcctgtatgcctcttcggccgcgacctac
ggcggtcgtaacgataacttcatcgaagaccgccaatacgagcagcctctgaacgtctat
ggctactccaagttcctgttcgatcagtacgtgcgtgagattctaccggaagcggaatcg
cagatctgcggcttccgctatttcaacgtctatggaccgcgcgaagggcacaaaggcagc
atggcaagcgtcgcgttccacctgaacaaccagattaatcagggtgaaaatccgaagctg
ttctctggtagcgaaaacttcaaacgtgacttcatttacgtcggtgatgtcgcggccgtc
aatctgtggttctggcaaaacggtgtttcgggcatcttcaactgcggtaccggtcgtgcc
gaatccttccaggccgttgccgacgccacactcgccttccataacaaaggcggcgtggag
tacatcgaattccctgaaaaactgaaaggccgctatcaggcctatacgcaggccgatctc
accaacttgcgggccgcgggctacgataagccgttcaaaaccgtcgccgaaggcgtagcg
gaatatatgacctggctgaaccgtaccgtttaa
DBGET
integrated database retrieval system
