Pectobacterium atrosepticum JG10-08: EV46_01080
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Entry
EV46_01080 CDS
T03199
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00071
Fatty acid degradation
patr00280
Valine, leucine and isoleucine degradation
patr00310
Lysine degradation
patr00362
Benzoate degradation
patr00380
Tryptophan metabolism
patr00410
beta-Alanine metabolism
patr00640
Propanoate metabolism
patr00650
Butanoate metabolism
patr00907
Pinene, camphor and geraniol degradation
patr00930
Caprolactam degradation
patr01100
Metabolic pathways
patr01110
Biosynthesis of secondary metabolites
patr01120
Microbial metabolism in diverse environments
patr01200
Carbon metabolism
patr01212
Fatty acid metabolism
Module
patr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EV46_01080 (fadB)
00650 Butanoate metabolism
EV46_01080 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EV46_01080 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EV46_01080 (fadB)
00310 Lysine degradation
EV46_01080 (fadB)
00380 Tryptophan metabolism
EV46_01080 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EV46_01080 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EV46_01080 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EV46_01080 (fadB)
00930 Caprolactam degradation
EV46_01080 (fadB)
Enzymes [BR:
patr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EV46_01080 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EV46_01080 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EV46_01080 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EV46_01080 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AIA69228
LinkDB
All DBs
Position
complement(239795..241984)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIAELVFSAPGSVNTLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KAAFIVGADITEFLSLFAAPAEKLHEWLVFANSIFNRLEDLPVPTLSAINSYALGGGCEC
VLATDFRLATPDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDVSAADALK
VGLVQAVVANEKLIPAAIKMLKQAINGELDWLGYRRPKLEALKLNKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDEALQLETQHFVQLARSNEARALVGIFLNGQYVK
GKAKKLIGETSVPKQAAVLGAGIMGGGIAYQSAFKGVPIRMKDINEKPLALGMNEAAKLL
NKQMERGKLDGMKMATILANIHPTLDYAGFERTDIVVEAVVENPKIKASVLAETELHVSE
NTILASNTSTIPIAVLAASLKRPQNFCGMHFFNPVHRMPLVEIIRGPKTSDSTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSILLRDGADFREIDNVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGQGFYRYQTDSKGKL
RKEQDEAVDTLLKDISQPKKTFSAEEIIARMMIPMINEVARCLEEGIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSERYVEMAQQLAHLSAIYQVPDGLQQKARSNEGYYPSVAPH
ADVSHGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgccgagctg
gtattttctgcccctggctctgtaaacacgctagatacccgcacggttgccagcctgggt
aaggcgctggacgttctggcggaacagccgaacctgaagggcttactgctgcgatcagac
aaagctgcatttattgtcggtgccgatatcacggaattcctttctctttttgccgcgccg
gccgaaaagctgcatgagtggcttgtcttcgccaacagcattttcaaccgtcttgaggat
ttacccgttcccacgctgtccgcgattaatagctatgcgctgggaggcggatgtgaatgc
gtgctggcgaccgattttcgcttagcaacgccagatgcacgaatcgggttgcctgagact
aaactcggaatcatgccgggctttggcggcacagtcaggctaccgcgtctgttaggtgca
gacagcgcgctggagattatcgccgcaggtaaagacgtcagcgcagccgatgctttaaaa
gtggggctggtgcaggctgttgtcgctaatgaaaaactgattcccgccgccatcaagatg
ctaaagcaggccataaatggcgagctggactggctgggttaccgacgcccgaaacttgag
gcgctgaagctcaataaaattgaagccatgatgagctttaccaccgccaaagcgatggtg
ctacaaaccgctgggaaacattatccagcgccgatgttagcggtaaaaaccatcgaagcc
gccgcaaccatgacacgtgatgaggcattgcagctcgaaacgcagcacttcgttcaactg
gcgcgttcaaatgaagctcgcgccctcgtcggcattttcctcaacggtcaatatgttaaa
ggaaaagcgaagaagctgattggcgaaacatccgtaccaaagcaggccgccgtgctgggt
gcgggcattatgggcggcggaattgcctatcaatccgcgttcaaaggcgtgccaattcgg
atgaaggatatcaacgagaagccactcgcgctggggatgaacgaggcagctaagctcctg
aataaacagatggaacgaggcaaactggacggaatgaaaatggcgacgattttggcaaac
attcacccgacgctggattacgccgggttcgaacgtaccgatatcgtagttgaagccgtc
gtagagaacccgaaaatcaaagccagcgtattagcggaaaccgaattgcacgttagcgag
aatacgattctggcttctaatacctcaacgattccaattgctgtgctggctgcatcgtta
aaacgaccgcaaaatttctgcggtatgcacttcttcaacccggtacaccgcatgccgctg
gtcgaaattattcgcggccctaaaaccagtgacagtaccatcgccagcgtggtggcttac
gccagcaagatgggcaagacgccgattgttgtgaacgattgcccaggattcttcgtaaat
cgcgtcctgttcccctactttgcagcattcagcatactgctcagagacggtgccgatttc
cgcgagatcgataacgtcatggagaagaaattcggctggccgatgggtccagcctatctg
ctggacgttgtcggcattgataccgctcaccatgcccaagcggtgatggcggaaggtttt
ccacagcggatggcgaaagactatcgcgatgcgattgacgtgttgtttgagcatcagcgc
tttgggcagaaaaatggtcagggtttctaccgttatcaaacggatagcaaagggaaactg
cgcaaagaacaggatgaagccgtagatacgctccttaaagacatcagccaaccgaaaaaa
acgttcagcgcagaagagattatcgctcggatgatgatcccaatgattaatgaagttgcg
cgctgtctggaagaaggtattgtcgccagtcctgccgaagcggacatggcactggtatat
gggttaggttttcctcccttccacggcggagcctgccgctatctggatacgttgggcagc
gaacgttatgtcgagatggcgcaacagctggcgcacctcagcgccatctatcaagtgcct
gacggcttacaacaaaaagccagaagcaatgaaggctattacccatcggtcgcgccacac
gcggacgtttcccacggtcaaccggcatga
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