Pectobacterium atrosepticum JG10-08: EV46_01260
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Entry
EV46_01260 CDS
T03199
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Pathway
patr00730
Thiamine metabolism
patr01100
Metabolic pathways
patr01240
Biosynthesis of cofactors
Module
patr_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
EV46_01260
Enzymes [BR:
patr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
EV46_01260
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIA69252
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All DBs
Position
complement(277733..279712)
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AA seq
659 aa
AA seq
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MSTEPLSINPLSATQEPSTSSKPSRREQRAAAQRFIETLQGTAFPNSKRIYLAGSRDDIA
VPMREIQLSPTLLGGSKDDPQYEPNEPIPVYDTSGPYGDPAAQPDVRVGLAKLRASWIAE
RHDTEALSGVSSDFTQQRMADAGLDHLRFEHLPRPLCAKTGKRVTQLHYARQGMITPEME
FIAIRENMGRERIRGEVLRQQHPGQSFGALLPENITPEFVRQEVAAGRAIIPSNINHPES
EPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI
LRNSPVPIGTVPIYQALEKVNGVAENLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPM
TAKRLTGIVSRGGSIMAKWCLSHHKESFLYEHFREICEICAAYDVALSLGDGLRPGSIQD
ANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLG
PLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHA
ADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPQTARAYHDETLPQESGKVAHFCSM
CGPKFCSMKISQEVRDYAAKQETEAKPIEIGMAEMSQEFRSRGSELYHSATSLQAEESK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaaccattgtctatcaaccccttgtctgcaacacaagagccatccacatcg
tcaaaaccaagtcgccgtgaacagcgtgctgccgctcagcggtttattgaaactttacag
ggaaccgcctttcccaattcaaaacgtatttaccttgcgggctcgcgtgacgacatcgcc
gtaccgatgcgggagattcagctcagcccgacgctactcggcggcagcaaagacgatccc
caatacgaacccaatgagccgatcccggtttatgatacatcagggccttatggcgacccc
gccgcgcaacccgatgtccgcgttgggttagcgaagctgcgtgccagttggattgcagaa
cgtcacgacaccgaagcgttatccggcgtcagctccgatttcacccaacagcgcatggcg
gatgctggtctggatcatctgcgcttcgaacatttgccacgaccgctgtgtgccaaaaca
ggcaaacgcgtcacccagcttcactatgcgcgacagggcatgattacccccgaaatggaa
tttatcgctattcgcgaaaatatgggacgcgagcgcattcgcggcgaagttctgcgccaa
cagcatccgggccaaagtttcggtgccctcctgccggaaaacatcacgccggaattcgtc
cgtcaggaagtggctgccgggcgcgctattattccctcaaacatcaatcacccagaatcg
gaaccgatgattatcggccgcaattttctggtgaaagttaacgccaatattggtaactcc
gccgtgacgtcctccatcgaagaagaggtggaaaagctggtctggtctacccgttggggc
gcggatacggtgatggatctctcgaccggacgctatattcacgagactcgcgagtggatt
ctgcgtaacagtccggtgccaatcgggacagtgccaatctatcaggcgctggagaaagtg
aacggcgtggcggaaaacctgaactgggaaatgttccgcgatacgctactggaacaggcc
gagcaaggggtggactatttcaccatccatgctggcgtgctgttgcgctacgtcccgatg
acggccaaacgcctgaccggcatcgtctcgcgcgggggttccatcatggcgaagtggtgc
ctgtcgcatcacaaagagagcttcctgtacgaacacttccgcgaaatctgtgaaatctgc
gccgcttatgatgtcgcgctgtcgctgggtgacggcttacgcccaggctccattcaggat
gccaatgacgaagcgcagtttgccgagctgcatacactgggtgagctaaccaaaattgcc
tgggaatacgacgtacaggtaatgatcgaaggccccgggcacgttccgatgcagatgatc
cgccgcaacatgaccgaagagctggagcactgtcacgaagcgccgttctacacactcggc
ccgctaaccacagatattgcaccgggttacgatcactttacctctggcatcggtgccgcc
atgatcggctggttcggttgtgcgatgctctgttacgtgacaccgaaagagcatctcggc
ttgccgaacaaagaagacgtcaagcaagggctgattacctacaagatcgccgcccacgcg
gccgatcttgcgaagggtcaccccggcgctcaaatccgtgataacgccatgtctaaagcg
cgcttcgaattccgttgggaagatcagttcaatctggcactcgatccgcaaacggcacgc
gcctaccacgatgaaacgttgccgcaagaatccggtaaagtcgcccacttctgttccatg
tgcggtcctaaattctgttcgatgaaaatctcacaggaagtgcgcgattacgccgcgaaa
caggaaacggaagccaaaccgattgaaattggcatggctgagatgtcgcaggaattccgc
tctcgtggcagcgagctttatcacagcgccaccagcctacaagccgaggaaagcaaatga
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