Pectobacterium atrosepticum JG10-08: EV46_03550
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Entry
EV46_03550 CDS
T03199
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EV46_03550
Enzymes [BR:
patr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EV46_03550
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
RhgB_N
CdAMP_rec
Motif
Other DBs
NCBI-ProteinID:
AIA69679
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Position
776855..778585
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AA seq
576 aa
AA seq
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MKRSVLLLVGATLAPYSYSAQDNAVSLSVSGLNTVLDNGLLKATFGEDGSAVSMVTGGNN
IVTNLSGAARDPSKTRSAYLDYYINNGNVKGVKDFTPERVEVLRNDREMAHVAYIDDRGG
LLKLEYHLIMRRGVSGLYSYVVAENSGSQDVNVSELRNVYRFDPARLDHLYSGVRQGKPL
LYSQLEASPKVQDETWRLPDGSIYSKYDFAGYMRTAPFWGVFGNGVGAWLIHGNREYFSG
DALKQDLLVHQDAIILNYMTGSHFGTPDMAAQPGWKKFYGPWLLYINQGDTEQMLADAQR
QALTETVSWPYKWVSDSRYPIDRTQVSGRVASQQSVTVVLSSSLDEPFDVQTRGYSYQAT
IDSKGNFAIPHVRPGNYHLAVYANSGTQPGILVEQTLSVSGDKQVLPMITLPKAESVVWA
IGQANRQASEFRFGNEARNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQ
PEKKTYFLNIALAAASNSGMSEPTVPQLAVMVNGTMLETLTYDNDKAIYRGALQSGRYHV
ARIPVSSGFLKKGNNTITLQLKGGSVMYDVVTLSEE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgatctgtcttgttgttggtgggtgccacgctggcaccctatagctatagtgcg
caggataatgccgtgtcgttatccgtttccggtttgaataccgttctggataacggcttg
ctaaaagccacattcggggaggatggcagcgcggtgagcatggtgacgggcggcaataat
attgtcactaacctgtccggtgcggcacgcgatccgagcaaaacgcgtagcgcttacctc
gattactatatcaataatggcaatgttaaaggcgtcaaagatttcactcccgagcgcgtg
gaagtgctgcgtaacgatcgtgagatggcgcatgtggcctatatcgacgatcgaggcggg
ttgttaaagctcgaatatcatctgattatgcgtcgtggcgttagcgggctttatagctat
gtggtggccgaaaatagcggaagtcaggatgttaacgtcagtgaactgcgtaatgtctat
cgcttcgatcctgcacggttagaccatctctacagcggcgttcgtcagggtaagccgctg
ctctacagccagcttgaagcctcgccaaaggtgcaggatgaaacctggcgactgccggat
ggcagcatctattccaaatatgacttcgctggttatatgcggaccgcgcctttctggggt
gttttcggcaatggcgtgggcgcatggttgattcacggcaaccgagagtatttctccggt
gatgcgctcaagcaggatttgttggtgcatcaggatgcgatcattctgaactatatgacg
gggtcgcactttggcacgccggatatggcggcacaaccgggctggaaaaaattctatggc
ccatggctgctgtacattaatcagggcgataccgaacagatgctggcggatgcccagcgt
caggcgctgacggaaacggtcagttggccgtataaatgggtgagcgattcccgttatcct
atcgatcgcacgcaggttagcggacgcgttgccagccagcagtcagtcactgttgtgctt
tcatcatcattggatgagccatttgatgtgcagacccgcggctattcgtatcaggcaacg
attgactcgaaggggaattttgccattcctcatgtccgaccgggtaattaccatctggcc
gtgtacgctaacagcggtacgcagccggggatattggtggagcaaacgctgtccgtttct
ggtgataagcaagtactgccgatgataacgctgcctaaagccgaatcggttgtctgggcc
atcggacaggcaaatcgacaggcgagcgaatttcgttttggcaatgaggcacgcaacacc
cgctggcagcatgaggttcctgcaaatctgacgttcgatattggccgcagcgactatcag
cgcgactggtattacgcgcagaccaaaccgggaaaatgggatatccgcttcgcgctacaa
cctgagaagaaaacctatttccttaacatcgcactggcggcagccagcaacagcggcatg
agcgagccaaccgtgccacagttggcggtaatggtaaacggcaccatgctggagacacta
acttacgacaacgataaagccatctatcgcggtgcgctacagagcggtcgctatcacgtt
gcgcgtatccccgtgtcatccggtttcctgaaaaaaggcaacaacacaatcacgctgcaa
ttaaaaggcggcagcgtgatgtatgacgtggtgacgttaagcgaggagtaa
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