Pectobacterium atrosepticum JG10-08: EV46_03575
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Entry
EV46_03575 CDS
T03199
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
patr02000
]
EV46_03575
Transporters [BR:
patr02000
]
Other transporters
Pores ion channels [TC:
1
]
EV46_03575
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
DUF2193
Motif
Other DBs
NCBI-ProteinID:
AIA69684
LinkDB
All DBs
Position
784763..787132
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AA seq
789 aa
AA seq
DB search
MVKFRTHLLARILRAGVLGASFASVLPMAAVYAASAVSVQQYAVSSGPLNQVLNQFAQQA
GVLLSYDPALVAGKRGAGLQGNYSIEQGFQQILSNSGISAQYSADGSVMLVQRTTSEPVP
VSAPVVAKNDRIVVNAPPNTAMKLDVPVSETPRAVAVVTEKQIEERGAQKIDQALRYSSG
ILATTYGPDNKAEWVTIRGFSDQSRFQNGLATLNEDGFYGQQIEPFGVERIEVLKGPASV
LYGQNPPGGLVNVITKRPTRLPQGKVELEYGSNDYRHLAVDSAGPLNDDGSVLYRVVALA
RDTSGEMDFSKSKRLYLAPSVTFLGEDTELTVLASYMDTNSDTTNGFKLPYGTLHGTPFG
KVGYKTSLGEPGMNRHDTRQFNLGYEFTHHLNDTWTFHQNLNYAYLNLDLRNAYALSMAD
ARQANRGLTYRDGFAQNWATDNRLVGEWQWEDIENTLLLGFDYRRANAQSRDGNLYSFGA
PIDIFNPVYGNYASPDSQLFDHRSGRHQTGYYVQNQIKYDERLIVLLGGRYDVAKSRDRN
LSSGEDTRTDDTKFTKTAGVMYLFDNGISPYISYSESFLPVSGRDGYQRPYVPEEGQQTE
VGVKYTPEGFNGYASAALFNLEQKNVKTTDPKNPNLTIQSGEARSRGLELELSGEVYTGL
TLTANYTYNEVETTKSGSVGEVGKRLPGLPEQIVSGWATYAFNGKLGGLSIGSGVRYVGS
SYGNIANTADMKVPAYTLWDAMIAYDFSKDWRLQVNATNLANHEYVSACNYWCYYGEGRN
VSANVSYRW
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggttaaatttcgtacccacctgttggctcgtattttacgtgccggggtacttggggca
tcgtttgcttcagtgctgccaatggcggcggtctatgctgcatctgctgtgtctgtccaa
caatacgcggtgtcgtctggcccgctcaatcaggtactgaatcaatttgcccaacaggct
ggcgtattactttcttacgatccagcattagtggcaggtaaacgcggtgcggggttgcag
gggaactacagcattgagcagggtttccagcagattctcagcaatagtggcataagtgcg
cagtacagtgctgatggtagcgtgatgctagtgcagcgcacgacgagtgagccagtaccc
gtttctgcacctgttgtcgctaaaaacgatcgaattgtcgttaatgccccgccgaatacc
gcgatgaagttggatgtaccggtttcagaaacgccgcgcgcggttgcggttgtgacagaa
aaacagatcgaagagcgcggtgcgcaaaaaatcgatcaggcactgcgctacagcagcggt
attctggccacgacatacgggccggataataaggccgaatgggtgactattcgtggattt
agcgatcaatctcggttccagaatggtctggctacgctgaatgaagatggattctatggc
cagcagattgagccatttggggtcgagcgtatcgaggttctgaaaggcccagcctctgtt
ctgtatggacaaaacccgccgggcggcctggttaatgtcatcaccaaacggccgacgcgt
ttgccgcagggaaaagtggagctggaatacggttctaacgactatcgccatctggccgtc
gacagtgcgggtccgttaaatgatgatggctcggtgctgtatcgcgttgtcgcgctggct
cgcgatacctcgggtgagatggatttctcgaagagtaagcgactttacctggctccgagc
gtcacgttcctcggagaagacaccgaactgaccgtgttagccagctacatggatacgaat
tccgacacgaccaacggctttaaactgccgtacggtacattacatggcacgccgtttggc
aaagttggctataaaacatcgctgggtgaaccgggaatgaaccgccatgatacccggcag
ttcaatctgggttatgagttcacgcatcatctgaatgatacctggacgttccaccagaat
ctgaactatgcctaccttaatttggatctgcgtaatgcttatgcgctgagtatggctgat
gcgcgtcaggctaatcgtgggttgacctaccgcgacggctttgcgcaaaactgggccacg
gataaccgcttagtgggggaatggcagtgggaagatattgaaaacactctgttgctcggg
tttgactatcgtcgcgccaatgcgcaaagccgcgatggtaatctgtactcctttggcgcc
cctatcgatatttttaatccggtctacggtaactatgcgtcacctgacagccaactgttc
gatcatcgttctggacgccatcagaccggttactacgttcagaatcagatcaagtatgac
gagcgcctgatcgtcttgctgggtggacgttacgacgtggcgaagtctcgcgaccgtaat
ttatcatcaggcgaggatacccgcaccgacgataccaaattcaccaagactgctggggta
atgtatctgtttgacaacgggatctccccttacatcagctactcggaatcgttcctaccg
gtgtcaggccgtgatggttaccaacgtccttatgtgccggaagaaggccaacagacggaa
gttggcgtgaaatatacgccggaaggctttaacggttatgcgtctgctgccttgtttaat
ctggaacagaaaaacgttaaaacgacggatcctaaaaacccgaatctgactattcagtcg
ggtgaagcccggtcacgtggcctcgaattggaattgagtggtgaggtctataccggcctg
acgctgacggcaaactacacttacaacgaagtggagacgaccaaatcgggttccgttggt
gaagtcggcaaacgtcttccgggattgcctgagcaaatcgtgtctggctgggcgacctat
gcctttaacggcaaactgggagggttaagtatcggtagtggcgtgcgctatgttggcagc
tcttacggcaacattgccaatacggcggatatgaaggttccggcttatacgctgtgggat
gcgatgattgcctatgatttcagcaaagactggcggttgcaggttaatgccaccaatctg
gcaaatcacgagtacgtcagcgcctgtaactattggtgctactacggcgaaggccgtaac
gttagcgcgaatgtcagctatcgttggtaa
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