Pectobacterium atrosepticum JG10-08: EV46_06220
Help
Entry
EV46_06220 CDS
T03199
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
patr03000
]
EV46_06220
Transcription factors [BR:
patr03000
]
Prokaryotic type
Helix-turn-helix
Other families
EV46_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
GAF
Sigma54_activ_2
GAF_2
GAF_3
AAA_5
Mg_chelatase
HTH_8
AAA
AAA_2
MCM
AAA_7
AAA_16
IstB_IS21
ABC_tran
HTH_50
nSTAND3
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AIA70192
LinkDB
All DBs
Position
1392429..1394408
Genome browser
AA seq
659 aa
AA seq
DB search
MISLNTSRVAGTWDIRREKLVDIAEALLRQQDPLSVLSVLAALSSEFVFFQSVTLSLPSY
GVWQQDVTQETPPQGECCSGGGHCTMPLNSTSPLQGELSFIRSRGGHFTPEELGFLRQVA
CLAGGVLSHICHNKTLLDESQQMRHQRDHFRILVDITNSVLSHLDMDALVQEVSREIHRF
FGVQYIAMALSNSEKPADFRLWSTYYAPESPVSRHQCTFPRAKSLTEHVLQSHEVVVLNL
DDDRCQQARDTFFDELRSRQLSTVCLLPLSFNSEPLGVLVLAYEQADFFHDNHLNLLQQI
AARIGIAVDNADAYGQISRLKDTLKNENIWLNARIQNTDAEGDIIYQSAQMRSVLEQMSM
VATSDSTVLILGETGTGKELIARAIHKMSYRHKGSMVKMNCAAVPSGLLESDLFGHEKGA
FTGASTVHIGRFEMAEGGSLFLDEIGDMPLELQPKLLRVLQEREIERLGSNKVIPVDVRL
IAATNRDLKQMSMDREFRSDLYYRLNVFPISIPPLRERPEDIPLLAKFFVQKIAHRMKRS
IDNIPAQALRQLCQYPWPGNVRELENVIERAVILTRGSTLNLQMHELNVSVPSVSVKENK
IALTPPPENDENERQRIIQVLRETNGVVAGPRGAALRLGLKRTTLLSRMQRLGISIYDL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgatttcactaaatacttcccgagttgctggcacctgggatatccggcgagagaaactg
gtcgatatcgcggaggcgttactccgccagcaggatccactctccgttttatcggttctg
gcagccctatcctctgaattcgttttcttccagtcggttacgttgtcgttgcccagctat
ggtgtctggcagcaggatgtcacgcaggaaaccccgccgcagggcgagtgttgttccggt
ggcggacactgtacgatgccgctaaacagtaccagcccgttgcagggggaattgagtttt
attcgttcccgtggtggacattttacgccagaagagcttggttttctgcgtcaggtggcc
tgccttgctggcggagtgctttcccatatttgccacaacaaaaccttgctggatgagtcc
cagcagatgcgccatcagcgcgatcatttccgcattctggtcgatattacgaactcggtg
ctatctcatctggatatggatgcgctggtgcaggaagtttcgcgggagatccaccgtttt
tttggcgttcagtatattgcgatggcgctcagcaacagtgaaaaacctgctgatttccgc
ctatggtcgacctattatgccccagagtccccggtatcccgccatcagtgtacgtttcct
cgtgcgaaatcgttaactgagcacgttctacaaagccacgaggtcgtcgtgctcaatctt
gacgacgatcgctgccaacaggctcgcgatactttttttgatgaattgcgttcccgccag
ttgtctacggtgtgtctgttgccgctttctttcaatagtgagccgttaggtgtgctggtt
ctggcctatgagcaagcggatttttttcatgacaatcatctgaatctgttgcagcaaata
gcggctcgtatcggcatcgctgtggataacgccgatgcttacggtcagatttcgcgtctg
aaagataccttaaagaatgaaaatatctggctcaatgcgcgtattcagaacacggatgcc
gagggcgatatcatatatcaaagcgctcagatgcggtcggtattggagcaaatgagtatg
gtggcgacgagcgacagtaccgtactgatcctcggggaaaccggtacgggtaaagagctg
attgcacgggctattcataagatgagctatcggcacaaagggtcgatggtcaaaatgaac
tgcgccgccgtgccttcaggtctgttggaaagcgatctgtttgggcatgaaaaaggggca
tttaccggggcttccacggttcatatcgggcgttttgaaatggcggaaggcggctcgctg
tttttggatgaaattggcgatatgccgcttgagcttcagcccaagctgttgcgggtgcta
caggagagggaaatcgagcgactgggtagtaataaggtcatcccagtagatgtacgcctg
attgccgcaaccaatcgcgacctgaagcagatgtcgatggatcgcgaattcagaagcgat
ttgtattaccggctgaatgttttcccgatctctattccgccgctacgcgaacggcctgaa
gatattcctctgctggcgaaattctttgtccagaaaattgcgcatagaatgaaacgtagc
atagacaacattccggcgcaggcgctgcgccagctctgccagtacccctggccgggaaat
gtgcgcgagctggaaaatgtcatcgaaagggcggtgatcctgacccgaggttcaacgctg
aatttgcagatgcacgagctgaatgtgtctgtaccgtcggtatcggtgaaagagaataaa
attgctctgacaccgccgccggaaaacgatgagaatgaacgtcagcgcatcatccaagtg
ctgcgagaaaccaacggcgtggtggctgggccacgtggtgcggccctgcggttagggctg
aaacgcaccacgctgctttcgcgtatgcagcggctagggatttcgatatacgatttataa
DBGET
integrated database retrieval system
